RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 KIAA1958Q8N8K9 716 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 OR10Q1Q8NGQ4 319 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 TRIB2Q92519 343 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 LGALS12Q96DT0 336 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 HHIPQ96QV1 700 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 SEPT5Q99719 369 aaPredicted RBP18.62■□□□□ 0.57
RTN4-201ENST00000317610 ACPTQ9BZG2 426 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 SPC25Q9HBM1 224 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 AASSQ9UDR5 926 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 DNMT3LQ9UJW3 386 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.62■□□□□ 0.57
RTN4-201ENST00000317610 OR2A25A4D2G3 310 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 FADS2O95864 444 aaKnown RBP18.62■□□□□ 0.57
RTN4-201ENST00000317610 EPB42P16452 691 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 CD40LGP29965 261 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 SGSHP51688 502 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 ZNF177Q13360 481 aaPredicted RBP18.62■□□□□ 0.57
RTN4-201ENST00000317610 CCDC81Q6ZN84 652 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 SERPINA11Q86U17 422 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 RBFAQ8N0V3 343 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 ZNF540Q8NDQ6 660 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 IPCEF1Q8WWN9 437 aaPredicted RBP18.62■□□□□ 0.57
RTN4-201ENST00000317610 HPS1Q92902 700 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 TESCQ96BS2 214 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 CDK5RAP1Q96SZ6 601 aaKnown RBP18.62■□□□□ 0.57
RTN4-201ENST00000317610 PITX2Q99697 317 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 BOCQ9BWV1 1114 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 APOL5Q9BWW9 433 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 DSN1Q9H410 356 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 LHX3Q9UBR4 397 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 DLGAP4Q9Y2H0 992 aa18.62■□□□□ 0.57
RTN4-201ENST00000317610 SEC24AO95486 1093 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 GSNP06396 782 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 PRPS2P11908 318 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 ITGB6P18564 788 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 CA5AP35218 305 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 EIF2DP41214 584 aaKnown RBP18.61■□□□□ 0.57
RTN4-201ENST00000317610 CDKN2CP42773 168 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 FKBP1BP68106 108 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 LAPTM4AQ15012 233 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 PGS1Q32NB8 556 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 PLEKHG6Q3KR16 790 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 CATSPEREQ5SY80 951 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 GPRC6AQ5T6X5 926 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 MSANTD1Q6ZTZ1 278 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 RTN4RL1Q86UN2 441 aaPredicted RBP18.61■□□□□ 0.57
RTN4-201ENST00000317610 FAM9CQ8IZT9 166 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 TTC29Q8NA56 475 aaPredicted RBP18.61■□□□□ 0.57
RTN4-201ENST00000317610 EFHD2Q96C19 240 aaPredicted RBP18.61■□□□□ 0.57
RTN4-201ENST00000317610 ULK4Q96C45 1275 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 RHNO1Q9BSD3 238 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 GPR63Q9BZJ6 419 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 PARVBQ9HBI1 364 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 PCDH12Q9NPG4 1184 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 PRSS21Q9Y6M0 314 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 ZNF106Q9H2Y7 1883 aaKnown RBP18.61■□□□□ 0.57
RTN4-201ENST00000317610 DNAH12Q6ZR08 3092 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 MICAL3Q7RTP6 2002 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 SLC25A14O95258 325 aaPredicted RBP18.61■□□□□ 0.57
RTN4-201ENST00000317610 KRT6AP02538 564 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 KRT6BP04259 564 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 ATP5C1P36542 298 aaKnown RBP18.61■□□□□ 0.57
RTN4-201ENST00000317610 KRT6CP48668 564 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 ARPP19P56211 112 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 GTF2H3Q13889 308 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 DGCR6Q14129 220 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 UBE2UQ5VVX9 321 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 DSG4Q86SJ6 1040 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 SLC22A16Q86VW1 577 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 BEND7Q8N7W2 519 aaPredicted RBP18.61■□□□□ 0.57
RTN4-201ENST00000317610 EPS8L2Q9H6S3 715 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 CWH43Q9H720 699 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 SP140LQ9H930 580 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 SACM1LQ9NTJ5 587 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 THG1LQ9NWX6 298 aaKnown RBP18.61■□□□□ 0.57
RTN4-201ENST00000317610 PPT2Q9UMR5 302 aa18.61■□□□□ 0.57
RTN4-201ENST00000317610 A0A1B0GVM2 712 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 ISPDA4D126 451 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 TSPAN3O60637 253 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 FAM20BO75063 409 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 PCSK2P16519 638 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 PRPH2P23942 346 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 GPR17Q13304 367 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 SMN1Q16637 294 aaKnown RBP18.6■□□□□ 0.57
RTN4-201ENST00000317610 TRIM71Q2Q1W2 868 aaKnown RBP18.6■□□□□ 0.57
RTN4-201ENST00000317610 KIAA1614Q5VZ46 1190 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 ZBTB2Q8N680 514 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 SOCS4Q8WXH5 440 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 TTLL2Q9BWV7 592 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 CPNE5Q9HCH3 593 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 SCN8AQ9UQD0 1980 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 CLDN9O95484 217 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 PRAMEF1O95521 474 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 ZNF682O95780 498 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 KRT20P35900 424 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 UGT2B10P36537 528 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 NKX3-2P78367 333 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 SLC14A1Q13336 389 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 PROX2Q3B8N5 592 aa18.6■□□□□ 0.57
RTN4-201ENST00000317610 FAM171A1Q5VUB5 890 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms