RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 BLMHQ13867 455 aa17.83■□□□□ 0.45
CCDC43-201ENST00000315286 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.83■□□□□ 0.45
CCDC43-201ENST00000315286 OR56A3Q8NH54 315 aa17.83■□□□□ 0.45
CCDC43-201ENST00000315286 APIPQ96GX9 242 aa17.83■□□□□ 0.45
CCDC43-201ENST00000315286 HIC2Q96JB3 615 aa17.83■□□□□ 0.45
CCDC43-201ENST00000315286 ZNF514Q96K75 400 aaPredicted RBP17.83■□□□□ 0.45
CCDC43-201ENST00000315286 LINC00615Q96LM1 132 aaPredicted RBP17.83■□□□□ 0.45
CCDC43-201ENST00000315286 RSPH9Q9H1X1 276 aaPredicted RBP17.83■□□□□ 0.45
CCDC43-201ENST00000315286 ACTR3BQ9P1U1 418 aa17.83■□□□□ 0.45
CCDC43-201ENST00000315286 CKAP5Q14008 2032 aa17.83■□□□□ 0.45
CCDC43-201ENST00000315286 VEGFDO43915 354 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 UGDHO60701 494 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 CAPNS1P04632 268 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 GALK1P51570 392 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 EEFSECP57772 596 aaKnown RBP17.83■□□□□ 0.44
CCDC43-201ENST00000315286 ADAM15Q13444 863 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 PWP1Q13610 501 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 DOC2AQ14183 400 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 NUMA1Q14980 2115 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 CST6Q15828 149 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 SPANXN4Q5MJ08 99 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 AGBL4Q5VU57 503 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 LCN8Q6JVE9 175 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 NUDT18Q6ZVK8 323 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 KLHDC8AQ8IYD2 350 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 ZNF513Q8N8E2 541 aaPredicted RBP17.83■□□□□ 0.44
CCDC43-201ENST00000315286 GLB1L3Q8NCI6 653 aaPredicted RBP17.83■□□□□ 0.44
CCDC43-201ENST00000315286 CANT1Q8WVQ1 401 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 SLC13A3Q8WWT9 602 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 LRTOMTQ8WZ04 291 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 CMTM7Q96FZ5 175 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 MAGEB10Q96LZ2 347 aaPredicted RBP17.83■□□□□ 0.44
CCDC43-201ENST00000315286 KCTD14Q9BQ13 255 aaPredicted RBP17.83■□□□□ 0.44
CCDC43-201ENST00000315286 CLMPQ9H6B4 373 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 GPR34Q9UPC5 381 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 USP22Q9UPT9 525 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 PRKAB1Q9Y478 270 aa17.83■□□□□ 0.44
CCDC43-201ENST00000315286 ARPC2O15144 300 aa17.82■□□□□ 0.44
CCDC43-201ENST00000315286 SOX11P35716 441 aa17.82■□□□□ 0.44
CCDC43-201ENST00000315286 RPS14P62263 151 aaKnown RBP17.82■□□□□ 0.44
CCDC43-201ENST00000315286 NFE2L1Q14494 772 aa17.82■□□□□ 0.44
CCDC43-201ENST00000315286 C2orf27AQ580R0 203 aa17.82■□□□□ 0.44
CCDC43-201ENST00000315286 PNCKQ6P2M8 343 aa17.82■□□□□ 0.44
CCDC43-201ENST00000315286 TRMT11Q7Z4G4 463 aaKnown RBP17.82■□□□□ 0.44
CCDC43-201ENST00000315286 C11orf96Q7Z7L8 435 aa17.82■□□□□ 0.44
CCDC43-201ENST00000315286 TICAM1Q8IUC6 712 aa17.82■□□□□ 0.44
CCDC43-201ENST00000315286 GALNT13Q8IUC8 556 aa17.82■□□□□ 0.44
CCDC43-201ENST00000315286 ADCY4Q8NFM4 1077 aa17.82■□□□□ 0.44
CCDC43-201ENST00000315286 COX14Q96I36 57 aa17.82■□□□□ 0.44
CCDC43-201ENST00000315286 CGREF1Q99674 301 aa17.82■□□□□ 0.44
CCDC43-201ENST00000315286 PIF1Q9H611 641 aa17.82■□□□□ 0.44
CCDC43-201ENST00000315286 BATF3Q9NR55 127 aa17.82■□□□□ 0.44
CCDC43-201ENST00000315286 SPTBN5Q9NRC6 3674 aaKnown RBP17.82■□□□□ 0.44
CCDC43-201ENST00000315286 C15orf38-AP3S2A0A0A6YYH1 394 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 C17orf113A0A1B0GUU1 675 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 SERTM1A2A2V5 107 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 AQP12BA6NM10 295 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 NPIPB8E9PQR5 432 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 PCDH8O95206 1070 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 IL6P05231 212 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 PGRP06401 933 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 TACR1P25103 407 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 CAMK2GQ13555 558 aaPredicted RBP17.81■□□□□ 0.44
CCDC43-201ENST00000315286 SELPLGQ14242 412 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 PRR23BQ6ZRT6 265 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 ARPINQ7Z6K5 226 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 HEATR4Q86WZ0 1026 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 RALGPS2Q86X27 583 aaPredicted RBP17.81■□□□□ 0.44
CCDC43-201ENST00000315286 PTRH1Q86Y79 214 aaKnown RBP17.81■□□□□ 0.44
CCDC43-201ENST00000315286 AQP12AQ8IXF9 295 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 FBXO15Q8NCQ5 510 aaPredicted RBP17.81■□□□□ 0.44
CCDC43-201ENST00000315286 ICA1LQ8NDH6 482 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 OR2L2Q8NH16 312 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 WDR20Q8TBZ3 569 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 FAM110BQ8TC76 370 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 ZNF480Q8WV37 535 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 GTF2H4Q92759 462 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 TRIM15Q9C019 465 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 SEMA6AQ9H2E6 1030 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 SERGEFQ9UGK8 458 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 NEUROG3Q9Y4Z2 214 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 F5P12259 2224 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 PCCBP05166 539 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 MTHFD1P11586 935 aaKnown RBP17.81■□□□□ 0.44
CCDC43-201ENST00000315286 UQCRBP14927 111 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 SEC13P55735 322 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 CLDN8P56748 225 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 MTPNP58546 118 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 MAPKAPK3Q16644 382 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 WSCD2Q2TBF2 565 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 DOK6Q6PKX4 331 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 ADAMTSL4Q6UY14 1074 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 FAM83HQ6ZRV2 1179 aaPredicted RBP17.81■□□□□ 0.44
CCDC43-201ENST00000315286 EZH1Q92800 747 aaPredicted RBP17.81■□□□□ 0.44
CCDC43-201ENST00000315286 LGR4Q9BXB1 951 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 VAPAQ9P0L0 249 aa17.81■□□□□ 0.44
CCDC43-201ENST00000315286 MGAT4DA6NG13 374 aa17.8■□□□□ 0.44
CCDC43-201ENST00000315286 VGLL3A8MV65 326 aa17.8■□□□□ 0.44
CCDC43-201ENST00000315286 K7EQS6 105 aa17.8■□□□□ 0.44
CCDC43-201ENST00000315286 DFNA5O60443 496 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms