RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 TAS2R13Q9NYV9 303 aa11.61□□□□□ -0.55
SCFD1-201ENST00000311943 POLG2Q9UHN1 485 aa11.61□□□□□ -0.55
SCFD1-201ENST00000311943 LNPEPQ9UIQ6 1025 aa11.61□□□□□ -0.55
SCFD1-201ENST00000311943 CHD6Q8TD26 2715 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 NPEPPSL1A6NEC2 478 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 TMEM150CB9EJG8 249 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 KIF2AO00139 706 aaPredicted RBP11.6□□□□□ -0.55
SCFD1-201ENST00000311943 PFDN6O15212 129 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 MED26O95402 600 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 ZBTB11O95625 1053 aaPredicted RBP11.6□□□□□ -0.55
SCFD1-201ENST00000311943 GUCA1CO95843 209 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 IMPA1P29218 277 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 CXADRP78310 365 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 PLOD1Q02809 727 aaPredicted RBP11.6□□□□□ -0.55
SCFD1-201ENST00000311943 PDAP1Q13442 181 aaKnown RBP11.6□□□□□ -0.55
SCFD1-201ENST00000311943 TEX35Q5T0J7 233 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 FAM219BQ5XKK7 198 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 FRMPD2BQ6IN97 320 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 KLHL35Q6PF15 583 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 LRRC56Q8IYG6 542 aaPredicted RBP11.6□□□□□ -0.55
SCFD1-201ENST00000311943 AMER2Q8N7J2 671 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 OR9A1PQ8NGU1 263 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 OR2L8Q8NGY9 312 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 ESAMQ96AP7 390 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 RAD51AP1Q96B01 352 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 L2HGDHQ9H9P8 463 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 C1GALT1Q9NS00 363 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 CUEDC1Q9NWM3 386 aaPredicted RBP11.6□□□□□ -0.55
SCFD1-201ENST00000311943 OR6C2Q9NZP2 312 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 AKAP7Q9P0M2 348 aaPredicted RBP11.6□□□□□ -0.55
SCFD1-201ENST00000311943 PCDHGA3Q9Y5H0 932 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 SPENQ96T58 3664 aaKnown RBP11.6□□□□□ -0.55
SCFD1-201ENST00000311943 E7ENX8 843 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 H3BMH7 237 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 KPNA5O15131 536 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 ZNF37AP17032 561 aaPredicted RBP11.6□□□□□ -0.55
SCFD1-201ENST00000311943 KCNC1P48547 511 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 ARL4DP49703 201 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 RPS18P62269 152 aaKnown RBP11.6□□□□□ -0.55
SCFD1-201ENST00000311943 IRF9Q00978 393 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 TAP2Q03519 686 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 DLG1Q12959 904 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 NAA30Q147X3 362 aaPredicted RBP11.6□□□□□ -0.55
SCFD1-201ENST00000311943 SLC9A5Q14940 896 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 UAP1Q16222 522 aaPredicted RBP11.6□□□□□ -0.55
SCFD1-201ENST00000311943 PTCHD3Q3KNS1 767 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 ARMC3Q5W041 872 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 KIAA0408Q6ZU52 694 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 C19orf47Q8N9M1 422 aaKnown RBP11.6□□□□□ -0.55
SCFD1-201ENST00000311943 MNS1Q8NEH6 495 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 UBXN4Q92575 508 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 DPYSL5Q9BPU6 564 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 MACROD1Q9BQ69 325 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 TAC3Q9UHF0 121 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 VPS9D1Q9Y2B5 631 aa11.6□□□□□ -0.55
SCFD1-201ENST00000311943 FER1L5A0AVI2 2057 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 LOC105369274A0A096LPK9 316 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 LOC102723532A0A0G2JNH3 316 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 MYO1CO00159 1063 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 EIF3HO15372 352 aaKnown RBP eCLIP11.59□□□□□ -0.55
SCFD1-201ENST00000311943 TOX3O15405 576 aaPredicted RBP11.59□□□□□ -0.55
SCFD1-201ENST00000311943 RAD1O60671 282 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 LIFP15018 202 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 MLLT3P42568 568 aaPredicted RBP11.59□□□□□ -0.55
SCFD1-201ENST00000311943 GPS2Q13227 327 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 C1orf189Q5VU69 101 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 FAM45BPQ6NSW5 357 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 PPP1R3BQ86XI6 285 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 OR4N4Q8N0Y3 316 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 CEP112Q8N8E3 955 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 FAM45AQ8TCE6 357 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 BBC3Q96PG8 261 aaPredicted RBP11.59□□□□□ -0.55
SCFD1-201ENST00000311943 RBBP8Q99708 897 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 DDA1Q9BW61 102 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 RHOJQ9H4E5 214 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 DHCR7Q9UBM7 475 aaKnown RBP11.59□□□□□ -0.55
SCFD1-201ENST00000311943 NCF1BA6NI72 391 aaPredicted RBP11.59□□□□□ -0.55
SCFD1-201ENST00000311943 NCF1CA8MVU1 366 aaPredicted RBP11.59□□□□□ -0.55
SCFD1-201ENST00000311943 STMND1H3BQB6 276 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 RRP8O43159 456 aaKnown RBP11.59□□□□□ -0.55
SCFD1-201ENST00000311943 WISP3O95389 354 aaPredicted RBP11.59□□□□□ -0.55
SCFD1-201ENST00000311943 DLGAP3O95886 979 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 LIPCP11150 499 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 FGF5P12034 268 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 NCF1P14598 390 aaPredicted RBP11.59□□□□□ -0.55
SCFD1-201ENST00000311943 PNLIPRP1P54315 467 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 CAV1Q03135 178 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 FRG1Q14331 258 aaKnown RBP11.59□□□□□ -0.55
SCFD1-201ENST00000311943 TSNQ15631 228 aaKnown RBP11.59□□□□□ -0.55
SCFD1-201ENST00000311943 TTLL9Q3SXZ7 439 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 TMEM164Q5U3C3 297 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 SBSNQ6UWP8 590 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 SYTL1Q8IYJ3 562 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 CACNA2D3Q8IZS8 1091 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 METTL27Q8N6F8 245 aaPredicted RBP11.59□□□□□ -0.55
SCFD1-201ENST00000311943 OR2L3Q8NG85 312 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 FOPNLQ96NB1 174 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 FMO2Q99518 471 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 EPB41L4BQ9H329 900 aa11.59□□□□□ -0.55
SCFD1-201ENST00000311943 FAM114A2Q9NRY5 505 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms