RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 PTCHD3Q3KNS1 767 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 CEP68Q76N32 757 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 SMYD1Q8NB12 490 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 RHNO1Q9BSD3 238 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 SLC32A1Q9H598 525 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 ATP13A3Q9H7F0 1226 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 TBC1D23Q9NUY8 699 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 GMEB1Q9Y692 573 aa24.68■■□□□ 1.54
HOXB3-201ENST00000311626 BOLA2-SMG1P6H3BVE0 249 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 JUNBP17275 347 aaPredicted RBP24.67■■□□□ 1.54
HOXB3-201ENST00000311626 LHCGRP22888 699 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 ATN1P54259 1190 aaPredicted RBP24.67■■□□□ 1.54
HOXB3-201ENST00000311626 ISL1P61371 349 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 GTF2IRD2BQ6EKJ0 949 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 GTF2IRD2Q86UP8 949 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 ADHFE1Q8IWW8 467 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 OR7A2PQ8NGA2 310 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 OR5K1Q8NHB7 308 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 SH3GL1Q99961 368 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 RIBC2Q9H4K1 309 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 DOLKQ9UPQ8 538 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 MYOFQ9NZM1 2061 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 ZNF648Q5T619 568 aaPredicted RBP24.67■■□□□ 1.54
HOXB3-201ENST00000311626 GRAMD4Q6IC98 578 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 CYP4Z1Q86W10 505 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 CALHM3Q86XJ0 350 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 CHPFQ8IZ52 775 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 ARL10Q8N8L6 244 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 PJA1Q8NG27 643 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 UBTD2Q8WUN7 234 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 FOXJ1Q92949 421 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 DPH2Q9BQC3 489 aaPredicted RBP24.67■■□□□ 1.54
HOXB3-201ENST00000311626 PRM3Q9NNZ6 103 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 KCTD5Q9NXV2 234 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 CFAP97Q9P2B7 532 aa24.67■■□□□ 1.54
HOXB3-201ENST00000311626 SLC1A7O00341 560 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 GSTM2P28161 218 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 PTPN6P29350 595 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 TMBIM6P55061 237 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 LSM3P62310 102 aaKnown RBP24.66■■□□□ 1.54
HOXB3-201ENST00000311626 PTSQ03393 145 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 ZNF829Q3KNS6 432 aaPredicted RBP24.66■■□□□ 1.54
HOXB3-201ENST00000311626 TTLL9Q3SXZ7 439 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 VTCN1Q7Z7D3 282 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 ZDHHC21Q8IVQ6 265 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 BEND7Q8N7W2 519 aaPredicted RBP24.66■■□□□ 1.54
HOXB3-201ENST00000311626 BORCS5Q969J3 196 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 PYURFQ96I23 114 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 CKMP06732 381 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 ALDH4A1P30038 563 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 NRIP1P48552 1158 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 CLDN8P56748 225 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 DDX39BQ13838 428 aaKnown RBP24.66■■□□□ 1.54
HOXB3-201ENST00000311626 ATG9BQ674R7 924 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 ZCCHC8Q6NZY4 707 aaKnown RBP24.66■■□□□ 1.54
HOXB3-201ENST00000311626 Q6ZNB5 142 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 PLPP6Q8IY26 295 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 TMEM132CQ8N3T6 1108 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 ZCCHC7Q8N3Z6 543 aaKnown RBP24.66■■□□□ 1.54
HOXB3-201ENST00000311626 SVOPLQ8N434 492 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 COPS8Q99627 209 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 P2RY13Q9BPV8 354 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 KCNH6Q9H252 994 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 BAG5Q9UL15 447 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 ERVK-11Q9UQG0 969 aa24.66■■□□□ 1.54
HOXB3-201ENST00000311626 TRIM64BA6NI03 449 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 RFXANKO14593 260 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 TOR1BO14657 336 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 MAP2K4P45985 399 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 LAIR1Q6GTX8 287 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 HS6ST3Q8IZP7 471 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 VOPP1Q96AW1 172 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 NRBF2Q96F24 287 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 FAIMQ9NVQ4 179 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 PSME2Q9UL46 239 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 TMPRSS11EQ9UL52 423 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.65■■□□□ 1.54
HOXB3-201ENST00000311626 FAM220BPB1ANY3 271 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 HOXA2O43364 376 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 HALP42357 657 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 NSG1P42857 185 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 CCR3P51677 355 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 CRTC3Q6UUV7 619 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 CMTM8Q8IZV2 173 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 TERB1Q8NA31 727 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 ZDHHC6Q9H6R6 413 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 A0A096LPI6 279 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 C16orf96A6NNT2 1141 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 BCKDKO14874 412 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 EFEMP2O95967 443 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 IGSF6O95976 241 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 BTLAQ7Z6A9 289 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 RDH14Q9HBH5 336 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 ZDHHC3Q9NYG2 299 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 USE1Q9NZ43 259 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 TMEM9Q9P0T7 183 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 ERVK-18Q9QC07 812 aa24.65■■□□□ 1.54
HOXB3-201ENST00000311626 GFRA2O00451 464 aa24.64■■□□□ 1.54
HOXB3-201ENST00000311626 BCAS1O75363 584 aaPredicted RBP24.64■■□□□ 1.54
HOXB3-201ENST00000311626 ERN1O75460 977 aaKnown RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms