RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 ADAM7Q9H2U9 754 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 SLC32A1Q9H598 525 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 CNOT11Q9UKZ1 510 aaKnown RBP12.89□□□□□ -0.35
SNED1-201ENST00000310397 SPIN1Q9Y657 262 aaPredicted RBP12.89□□□□□ -0.35
SNED1-201ENST00000310397 RFPL1O75677 317 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 IL7RP16871 459 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 AP1S2P56377 157 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 FER1L6Q2WGJ9 1857 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 FAM91A1Q658Y4 838 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 GALNT12Q8IXK2 581 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 TSEN15Q8WW01 171 aaKnown RBP12.89□□□□□ -0.35
SNED1-201ENST00000310397 MTERF1Q99551 399 aaKnown RBP12.89□□□□□ -0.35
SNED1-201ENST00000310397 DERL2Q9GZP9 239 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 TOR3AQ9H497 397 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 RNF6Q9Y252 685 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 ILVBLA1L0T0 632 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 ITGA3P26006 1051 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 GRIA1P42261 906 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 GRIA2P42262 883 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 PDE12Q6L8Q7 609 aaKnown RBP12.88□□□□□ -0.35
SNED1-201ENST00000310397 RBM12BQ8IXT5 1001 aaKnown RBP12.88□□□□□ -0.35
SNED1-201ENST00000310397 ZNF563Q8TA94 476 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 BIRC7Q96CA5 298 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 ZNF641Q96N77 438 aaPredicted RBP12.88□□□□□ -0.35
SNED1-201ENST00000310397 KCNC2Q96PR1 638 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 ZNF395Q9H8N7 513 aaPredicted RBP12.88□□□□□ -0.35
SNED1-201ENST00000310397 TM9SF3Q9HD45 589 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 C12orf4Q9NQ89 552 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 PCM1Q15154 2024 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 PCP4L1A6NKN8 68 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 NOTOA8MTQ0 251 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 PDPK1O15530 556 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 PRLP01236 227 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 STOMP27105 288 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 EMX2Q04743 252 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 PCDH1Q08174 1060 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 GRB14Q14449 540 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 LRRC70Q7Z2Q7 622 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 KCTD13Q8WZ19 329 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 KIAA1191Q96A73 305 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 SLC29A3Q9BZD2 475 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 WRAP73Q9P2S5 460 aaPredicted RBP12.88□□□□□ -0.35
SNED1-201ENST00000310397 FKBPLQ9UIM3 349 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 FGF3P11487 239 aaPredicted RBP12.88□□□□□ -0.35
SNED1-201ENST00000310397 RNASE12Q5GAN4 147 aaKnown RBP12.88□□□□□ -0.35
SNED1-201ENST00000310397 PRAMEF19Q5SWL8 479 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 CILP2Q8IUL8 1156 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 SMG7Q92540 1137 aaKnown RBP12.88□□□□□ -0.35
SNED1-201ENST00000310397 CREB3L1Q96BA8 519 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 KLRG1Q96E93 195 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 PCDHGB6Q9Y5F9 930 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 ANXA2P2A6NMY6 339 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 FANCGO15287 622 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 IRAK2O43187 625 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 ANXA2P07355 339 aaKnown RBP12.88□□□□□ -0.35
SNED1-201ENST00000310397 HSPB3Q12988 150 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 SCARB2Q14108 478 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 ATCAYQ86WG3 371 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 DNAJA4Q8WW22 397 aaPredicted RBP12.88□□□□□ -0.35
SNED1-201ENST00000310397 CNDP2Q96KP4 475 aaKnown RBP12.88□□□□□ -0.35
SNED1-201ENST00000310397 CEP295NLQ96MC4 621 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 ZFP3Q96NJ6 502 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 FARSBQ9NSD9 589 aaKnown RBP12.88□□□□□ -0.35
SNED1-201ENST00000310397 TMEM39AQ9NV64 488 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 TVP23BQ9NYZ1 205 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 ARL5CA6NH57 179 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 C2orf15Q8WU43 125 aaKnown RBP12.88□□□□□ -0.35
SNED1-201ENST00000310397 PIGVQ9NUD9 493 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 TOP3BO95985 862 aaKnown RBP12.88□□□□□ -0.35
SNED1-201ENST00000310397 CRISP3P54108 245 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 ATP6AP1Q15904 470 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 FRG2Q64ET8 278 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 EIF5AL1Q6IS14 154 aaKnown RBP12.88□□□□□ -0.35
SNED1-201ENST00000310397 GLIS1Q8NBF1 620 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 TTLQ8NG68 377 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 ACOT12Q8WYK0 555 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 CDKN2AIPNLQ96HQ2 116 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 FRG2BQ96QU4 278 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 MAPKAP1Q9BPZ7 522 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 CST11Q9H112 138 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 RIMKLBQ9ULI2 386 aa12.88□□□□□ -0.35
SNED1-201ENST00000310397 COL14A1Q05707 1796 aaKnown RBP12.88□□□□□ -0.35
SNED1-201ENST00000310397 MED1Q15648 1581 aaPredicted RBP12.88□□□□□ -0.35
SNED1-201ENST00000310397 SLITRK5O94991 958 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 ENGP17813 658 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 SLC10A7Q0GE19 358 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 RAB39AQ14964 217 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 KLHL35Q6PF15 583 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 TRUB1Q8WWH5 349 aaKnown RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 SLC9A6Q92581 669 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 RNF31Q96EP0 1072 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 ART5Q96L15 291 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 OR2B2Q9GZK3 357 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 TCF7L1Q9HCS4 588 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 CCM2LQ9NUG4 571 aaPredicted RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 IMP3Q9NV31 184 aaKnown RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 GDAP2Q9NXN4 497 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 ZFP37Q9Y6Q3 630 aaPredicted RBP12.87□□□□□ -0.35
SNED1-201ENST00000310397 TMEM233B4DJY2 109 aa12.87□□□□□ -0.35
SNED1-201ENST00000310397 FBP2O00757 339 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms