RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 TESCQ96BS2 214 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 MIEF2Q96C03 454 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ZSWIM3Q96MP5 696 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 VRK1Q99986 396 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 C1orf109Q9NX04 203 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 MEMO1Q9Y316 297 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 TCAF1Q9Y4C2 921 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 GMPPBQ9Y5P6 360 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF541Q9H0D2 1346 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SCN3AQ9NY46 2000 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SLX4Q8IY92 1834 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 NRXN3Q9Y4C0 1643 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 IGLV3-22A0A075B6J6 115 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SCELO95171 688 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SYNGR4O95473 234 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 C2P06681 752 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ATP1B2P14415 290 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CPN2P22792 545 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 FUT2Q10981 343 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 GTF2H2Q13888 395 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 DHCR24Q15392 516 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SLC36A3Q495N2 470 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 UBXN11Q5T124 520 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ARHGAP40Q5TG30 622 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 GTF2H2CQ6P1K8 395 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 FOXR1Q6PIV2 292 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PLCZ1Q86YW0 608 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 REXO1L1PQ8IX06 675 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ANKFN1Q8N957 763 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 OR56A1Q8NGH5 318 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SNX33Q8WV41 574 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SLC9A6Q92581 669 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CPXM1Q96SM3 734 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CDRT15Q96T59 188 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ZDHHC5Q9C0B5 715 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CST11Q9H112 138 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ELL3Q9HB65 397 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 MOV10Q9HCE1 1003 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PCDH12Q9NPG4 1184 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 GKN1Q9NS71 199 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 TMEM248Q9NWD8 314 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 FAM120CQ9NX05 1096 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 NXT1Q9UKK6 140 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 FZD10Q9ULW2 581 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 DIDO1Q9BTC0 2240 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 MYO5AQ9Y4I1 1855 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 NFKBIEO00221 500 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CLDN5O00501 218 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 TRIM38O00635 465 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 TGFB1I1O43294 461 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 FSBPO95073 299 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PEPDP12955 493 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 HOXD8P13378 290 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 GADD45AP24522 165 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 RORAP35398 523 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF84P51523 738 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 MECP2P51608 486 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 POLR2JP52435 117 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ERVK-8P63133 956 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 MLLT1Q03111 559 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 RAB33AQ14088 237 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 FGL2Q14314 439 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 NFE2L1Q14494 772 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 GRM7Q14831 915 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PLEKHN1Q494U1 663 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SNAP47Q5SQN1 464 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PRAMEF14Q5SWL7 426 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PRAMEF13Q5VWM6 474 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 FRG2Q64ET8 278 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 C15orf39Q6ZRI6 1047 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 IRF2BP2Q7Z5L9 587 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 UBALD2Q8IYN6 164 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CFAP52Q8N1V2 620 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ZCCHC7Q8N3Z6 543 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 OR9A1PQ8NGU1 263 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 KAT2AQ92830 837 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 COPS5Q92905 334 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 C7orf26Q96N11 449 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 FRG2BQ96QU4 278 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SEPHS2Q99611 448 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ACTRT3Q9BYD9 372 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SLC29A3Q9BZD2 475 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SEMA4AQ9H3S1 761 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ALG2Q9H553 416 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 RERGLQ9H628 205 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SPATA6Q9NWH7 488 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PTGFRNQ9P2B2 879 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 KCND3Q9UK17 655 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 AK5Q9Y6K8 562 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SCN8AQ9UQD0 1980 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 DOCK6Q96HP0 2047 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 A0A0J9YYE9 177 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ENO4A6NNW6 628 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 KIAA0355O15063 1070 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 TPST1O60507 370 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 STBD1O95210 358 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CSTBP04080 98 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ALOX5P09917 674 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 LINGO3P0C6S8 592 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 EBLN1P0CF75 366 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms