RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 FOXL2P58012 376 aa18.75■□□□□ 0.59
LIME1-201ENST00000309546 NKAIN1Q4KMZ8 207 aa18.75■□□□□ 0.59
LIME1-201ENST00000309546 ZC3H12BQ5HYM0 836 aaKnown RBP18.75■□□□□ 0.59
LIME1-201ENST00000309546 FCRL6Q6DN72 434 aa18.75■□□□□ 0.59
LIME1-201ENST00000309546 FIGLAQ6QHK4 219 aa18.75■□□□□ 0.59
LIME1-201ENST00000309546 TTLL10Q6ZVT0 673 aa18.75■□□□□ 0.59
LIME1-201ENST00000309546 RASGEF1CQ8N431 466 aa18.75■□□□□ 0.59
LIME1-201ENST00000309546 DLG3Q92796 817 aa18.75■□□□□ 0.59
LIME1-201ENST00000309546 MIB2Q96AX9 1013 aa18.75■□□□□ 0.59
LIME1-201ENST00000309546 PBKQ96KB5 322 aa18.75■□□□□ 0.59
LIME1-201ENST00000309546 MIPEPQ99797 713 aa18.75■□□□□ 0.59
LIME1-201ENST00000309546 NUDT9Q9BW91 350 aa18.75■□□□□ 0.59
LIME1-201ENST00000309546 MLXIPLQ9NP71 852 aa18.75■□□□□ 0.59
LIME1-201ENST00000309546 ZNF451Q9Y4E5 1061 aa18.75■□□□□ 0.59
LIME1-201ENST00000309546 TTLL8A6PVC2 850 aa18.74■□□□□ 0.59
LIME1-201ENST00000309546 E5RI56 91 aa18.74■□□□□ 0.59
LIME1-201ENST00000309546 H3BMM5 538 aa18.74■□□□□ 0.59
LIME1-201ENST00000309546 CEACAM4O75871 244 aa18.74■□□□□ 0.59
LIME1-201ENST00000309546 ESR1P03372 595 aa18.74■□□□□ 0.59
LIME1-201ENST00000309546 F7P08709 466 aaPredicted RBP18.74■□□□□ 0.59
LIME1-201ENST00000309546 MCM3P25205 808 aa18.74■□□□□ 0.59
LIME1-201ENST00000309546 CCNFP41002 786 aa18.74■□□□□ 0.59
LIME1-201ENST00000309546 MAGEA6P43360 314 aa18.74■□□□□ 0.59
LIME1-201ENST00000309546 DHX34Q14147 1143 aaKnown RBP18.74■□□□□ 0.59
LIME1-201ENST00000309546 SSPNQ14714 243 aa18.74■□□□□ 0.59
LIME1-201ENST00000309546 CAND1Q86VP6 1230 aaKnown RBP18.74■□□□□ 0.59
LIME1-201ENST00000309546 ATCAYQ86WG3 371 aa18.74■□□□□ 0.59
LIME1-201ENST00000309546 MAGEC3Q8TD91 643 aa18.74■□□□□ 0.59
LIME1-201ENST00000309546 TCF12Q99081 682 aa18.74■□□□□ 0.59
LIME1-201ENST00000309546 GPR83Q9NYM4 423 aa18.74■□□□□ 0.59
LIME1-201ENST00000309546 JRKLQ9Y4A0 524 aa18.74■□□□□ 0.59
LIME1-201ENST00000309546 ANKRD12Q6UB98 2062 aa18.73■□□□□ 0.59
LIME1-201ENST00000309546 A0A1B0GX78 115 aa18.73■□□□□ 0.59
LIME1-201ENST00000309546 PEX12O00623 359 aa18.73■□□□□ 0.59
LIME1-201ENST00000309546 CNOT3O75175 753 aaKnown RBP18.73■□□□□ 0.59
LIME1-201ENST00000309546 CD63P08962 238 aa18.73■□□□□ 0.59
LIME1-201ENST00000309546 COILP38432 576 aaPredicted RBP18.73■□□□□ 0.59
LIME1-201ENST00000309546 ARSFP54793 590 aa18.73■□□□□ 0.59
LIME1-201ENST00000309546 PAPD7Q5XG87 772 aaKnown RBP18.73■□□□□ 0.59
LIME1-201ENST00000309546 ZNF470Q6ECI4 717 aa18.73■□□□□ 0.59
LIME1-201ENST00000309546 NEPROQ6NW34 567 aa18.73■□□□□ 0.59
LIME1-201ENST00000309546 CCDC137Q6PK04 289 aaKnown RBP18.73■□□□□ 0.59
LIME1-201ENST00000309546 TTC29Q8NA56 475 aaPredicted RBP18.73■□□□□ 0.59
LIME1-201ENST00000309546 OR2Y1Q8NGV0 311 aa18.73■□□□□ 0.59
LIME1-201ENST00000309546 DENND1AQ8TEH3 1009 aa18.73■□□□□ 0.59
LIME1-201ENST00000309546 SELENOSQ9BQE4 189 aa18.73■□□□□ 0.59
LIME1-201ENST00000309546 MFRPQ9BY79 579 aa18.73■□□□□ 0.59
LIME1-201ENST00000309546 SPATA7Q9P0W8 599 aa18.73■□□□□ 0.59
LIME1-201ENST00000309546 LUZP4Q9P127 313 aa18.73■□□□□ 0.59
LIME1-201ENST00000309546 NUP210LQ5VU65 1888 aa18.73■□□□□ 0.59
LIME1-201ENST00000309546 CTAGE9A4FU28 777 aa18.72■□□□□ 0.59
LIME1-201ENST00000309546 PGRMC1O00264 195 aaKnown RBP18.72■□□□□ 0.59
LIME1-201ENST00000309546 PRICKLE3O43900 615 aaPredicted RBP18.72■□□□□ 0.59
LIME1-201ENST00000309546 DPM1O60762 260 aa18.72■□□□□ 0.59
LIME1-201ENST00000309546 PKMP14618 531 aaKnown RBP18.72■□□□□ 0.59
LIME1-201ENST00000309546 TSTA3Q13630 321 aaPredicted RBP18.72■□□□□ 0.59
LIME1-201ENST00000309546 THOC5Q13769 683 aaKnown RBP18.72■□□□□ 0.59
LIME1-201ENST00000309546 FASTKQ14296 549 aaKnown RBP18.72■□□□□ 0.59
LIME1-201ENST00000309546 ACSBG2Q5FVE4 666 aa18.72■□□□□ 0.59
LIME1-201ENST00000309546 MRPL14Q6P1L8 145 aaKnown RBP18.72■□□□□ 0.59
LIME1-201ENST00000309546 CENPUQ71F23 418 aa18.72■□□□□ 0.59
LIME1-201ENST00000309546 CILP2Q8IUL8 1156 aa18.72■□□□□ 0.59
LIME1-201ENST00000309546 TMEM151BQ8IW70 566 aa18.72■□□□□ 0.59
LIME1-201ENST00000309546 METTL27Q8N6F8 245 aaPredicted RBP18.72■□□□□ 0.59
LIME1-201ENST00000309546 EFCAB3Q8N7B9 438 aa18.72■□□□□ 0.59
LIME1-201ENST00000309546 OR2L3Q8NG85 312 aa18.72■□□□□ 0.59
LIME1-201ENST00000309546 FER1L6-AS2Q96M78 137 aa18.72■□□□□ 0.59
LIME1-201ENST00000309546 SERPINB12Q96P63 405 aa18.72■□□□□ 0.59
LIME1-201ENST00000309546 IP6K3Q96PC2 410 aa18.72■□□□□ 0.59
LIME1-201ENST00000309546 NAP1L3Q99457 506 aaPredicted RBP18.72■□□□□ 0.59
LIME1-201ENST00000309546 XAB2Q9HCS7 855 aaKnown RBP18.72■□□□□ 0.59
LIME1-201ENST00000309546 CUTCQ9NTM9 273 aa18.72■□□□□ 0.59
LIME1-201ENST00000309546 GALPQ9UBC7 116 aa18.72■□□□□ 0.59
LIME1-201ENST00000309546 VPS9D1Q9Y2B5 631 aa18.72■□□□□ 0.59
LIME1-201ENST00000309546 PCDHGB7Q9Y5F8 929 aa18.72■□□□□ 0.59
LIME1-201ENST00000309546 FAM169AQ9Y6X4 670 aa18.72■□□□□ 0.59
LIME1-201ENST00000309546 PCM1Q15154 2024 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 A0A0J9YVX5 310 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 FAM237BA0A1B0GVD1 139 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 SDR42E2A6NKP2 422 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 ARHGEF33A8MVX0 844 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 DSCR3O14972 297 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 NRP2O60462 931 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 CTSVO60911 334 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 USP1O94782 785 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 FKBP9O95302 570 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 MLNP12872 115 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 ATP5DP30049 168 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 ADARP55265 1226 aaKnown RBP18.71■□□□□ 0.59
LIME1-201ENST00000309546 VSX2P58304 361 aaPredicted RBP18.71■□□□□ 0.59
LIME1-201ENST00000309546 GBX1Q14549 363 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 GRM7Q14831 915 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 CYP2A13Q16696 494 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 KLHL38Q2WGJ6 581 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 ANKRD20A4Q4UJ75 823 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.71■□□□□ 0.59
LIME1-201ENST00000309546 TCTE1Q5JU00 501 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 SLC35F6Q8N357 371 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 CLEC1AQ8NC01 280 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 CPT1CQ8TCG5 803 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms