RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 DCSTAMPQ9H295 470 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 SEC14L4Q9UDX3 406 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 ICKQ9UPZ9 632 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 A0A0J9YVX5 310 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 OR6C74A6NCV1 312 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 VSTM5A8MXK1 200 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 TNFSF12O43508 249 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 ADRA2BP18089 450 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 PGAM4Q8N0Y7 254 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 RHBDF1Q96CC6 855 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 B3GAT2Q9NPZ5 323 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 MFSD11O43934 449 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 RHOP08100 348 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 HNRNPKP61978 463 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRIM56-201ENST00000306085 GALNT13Q8IUC8 556 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 EBF3Q9H4W6 596 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 DDX4Q9NQI0 724 aaKnown RBP13.14□□□□□ -0.31
TRIM56-201ENST00000306085 MIOSQ9NXC5 875 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 SCN8AQ9UQD0 1980 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 NFATC4Q14934 902 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 GPR152Q8TDT2 470 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 ARL5BQ96KC2 179 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 ZNF347Q96SE7 839 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 TMEM150BA6NC51 233 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 TCAF2A6NFQ2 919 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 CHKAP35790 457 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 SLC26A2P50443 739 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 POLR2HP52434 150 aaKnown RBP13.13□□□□□ -0.31
TRIM56-201ENST00000306085 CDH15P55291 814 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 CHIT1Q13231 466 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 SBK1Q52WX2 424 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 TMEM86AQ8N2M4 240 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 SHKBP1Q8TBC3 707 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 DDX1Q92499 740 aaKnown RBP13.13□□□□□ -0.31
TRIM56-201ENST00000306085 ZNF578Q96N58 590 aaPredicted RBP13.13□□□□□ -0.31
TRIM56-201ENST00000306085 BCAS3Q9H6U6 928 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 MKKSQ9NPJ1 570 aaPredicted RBP13.13□□□□□ -0.31
TRIM56-201ENST00000306085 OR2S2Q9NQN1 319 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 VWA7Q9Y334 891 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 F5H0A9 414 aaPredicted RBP13.13□□□□□ -0.31
TRIM56-201ENST00000306085 TM7SF2O76062 418 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 CASRP41180 1078 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 HECTD2Q5U5R9 776 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 UBE2UQ5VVX9 321 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 ZER1Q7Z7L7 766 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 TBL1XR1Q9BZK7 514 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 BIN3Q9NQY0 253 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 CMAHPQ9Y471 501 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 ATP10BO94823 1461 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 GPIP06744 558 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 FCAMRQ8WWV6 532 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 SLC35G5Q96KT7 338 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 NMUR2Q9GZQ4 415 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 HIF1ANQ9NWT6 349 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 TLL2Q9Y6L7 1015 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 SHOX2O60902 331 aaPredicted RBP13.13□□□□□ -0.31
TRIM56-201ENST00000306085 SREBF1P36956 1147 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 ELMOD2Q8IZ81 293 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 HBEGFQ99075 208 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 CPA4Q9UI42 421 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 RAB36O95755 333 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 ABHD2P08910 425 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 ALDH3B2P48448 385 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 ABRAXAS2Q15018 415 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 KCTD19Q17RG1 926 aaPredicted RBP13.13□□□□□ -0.31
TRIM56-201ENST00000306085 OR7G2Q8NG99 324 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 AMBNQ9NP70 447 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 GLYATL1P3A0A0U1RQE8 302 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 TOXO94900 526 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 CNOT4O95628 575 aaKnown RBP13.13□□□□□ -0.31
TRIM56-201ENST00000306085 SLC18A2Q05940 514 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 LPGAT1Q92604 370 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 ORAI3Q9BRQ5 295 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 RBMXP38159 391 aaKnown RBP13.13□□□□□ -0.31
TRIM56-201ENST00000306085 CYP27C1Q4G0S4 372 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 GSTM2P28161 218 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 CTNNB1P35222 781 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 GBE1Q04446 702 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 TLE3Q04726 772 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 TRIM28Q13263 835 aaKnown RBP13.13□□□□□ -0.31
TRIM56-201ENST00000306085 TEAD4Q15561 434 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 LRRC66Q68CR7 880 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 DCDC5Q6ZRR9 648 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 PBDC1Q9BVG4 233 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 ZNF521Q96K83 1311 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 AMZ1Q400G9 498 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 FIGNQ5HY92 759 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 MED27Q6P2C8 311 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 ZC3HC1Q86WB0 502 aaKnown RBP13.13□□□□□ -0.31
TRIM56-201ENST00000306085 TMEM145Q8NBT3 493 aa13.13□□□□□ -0.31
TRIM56-201ENST00000306085 PHPT1Q9NRX4 125 aaPredicted RBP13.13□□□□□ -0.31
TRIM56-201ENST00000306085 OR2AG2A6NM03 316 aa13.12□□□□□ -0.31
TRIM56-201ENST00000306085 RBM23Q86U06 439 aaKnown RBP13.12□□□□□ -0.31
TRIM56-201ENST00000306085 KIAA0895Q8NCT3 520 aa13.12□□□□□ -0.31
TRIM56-201ENST00000306085 OR6Q1Q8NGQ2 317 aa13.12□□□□□ -0.31
TRIM56-201ENST00000306085 DNAJC28Q9NX36 388 aa13.12□□□□□ -0.31
TRIM56-201ENST00000306085 RAB21Q9UL25 225 aa13.12□□□□□ -0.31
TRIM56-201ENST00000306085 K7EPK0 472 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms