RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 OR2B3O76000 313 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 SLC6A2P23975 617 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 CCR2P41597 374 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 HERVK_113P63132 956 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 HSPB3Q12988 150 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 KCNC3Q14003 757 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 ACSBG2Q5FVE4 666 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 PNCKQ6P2M8 343 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 ZDHHC24Q6UX98 284 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 HSD11B1LQ7Z5J1 315 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 ZNF276Q8N554 614 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 PRAP1Q96NZ9 151 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 DGAT2Q96PD7 388 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 ERVK-6Q9BXR3 956 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 UGT2B28Q9BY64 529 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 DKK3Q9UBP4 350 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 MTCH2Q9Y6C9 303 aa9.02□□□□□ -0.96
PTPRE-202ENST00000306042 CXorf49A8MYA2 514 aaPredicted RBP9.02□□□□□ -0.97
PTPRE-202ENST00000306042 PCDH7O60245 1069 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 DNAJC8O75937 253 aaPredicted RBP9.02□□□□□ -0.97
PTPRE-202ENST00000306042 ALBP02768 609 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 CDH1P12830 882 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 SERPINB1P30740 379 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 SLC26A3P40879 764 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 SGSHP51688 502 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 MSS51Q4VC12 460 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 FRG2Q64ET8 278 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 USP30Q70CQ3 517 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 ADHFE1Q8IWW8 467 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 CBARPQ8N350 705 aaPredicted RBP9.02□□□□□ -0.97
PTPRE-202ENST00000306042 GALNT4Q8N4A0 578 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 EID2Q8N6I1 236 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 POMGNT2Q8NAT1 580 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 MMABQ96EY8 250 aaPredicted RBP9.02□□□□□ -0.97
PTPRE-202ENST00000306042 FRG2BQ96QU4 278 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 CDC6Q99741 560 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 LTB4R2Q9NPC1 389 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 VPS29Q9UBQ0 182 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 CDH22Q9UJ99 828 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 TUBGCP6Q96RT7 1819 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 A8MUI8 341 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 IL9P15248 144 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 CCKBRP32239 447 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 MPIP34949 423 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 GRIA3P42263 894 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 YPEL5P62699 121 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 CDK3Q00526 305 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 LILRA6Q6PI73 481 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 RANBP10Q6VN20 620 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 CAND1Q86VP6 1230 aaKnown RBP9.02□□□□□ -0.97
PTPRE-202ENST00000306042 ZNF761Q86XN6 746 aaPredicted RBP9.02□□□□□ -0.97
PTPRE-202ENST00000306042 PMEPA1Q969W9 287 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 ZBED6CLQ96FA7 236 aaPredicted RBP9.02□□□□□ -0.97
PTPRE-202ENST00000306042 GTF2A1LQ9UNN4 478 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 SIX3O95343 332 aaPredicted RBP9.02□□□□□ -0.97
PTPRE-202ENST00000306042 HEXBP07686 556 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 MPC1LP0DKB6 136 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 FCGR1AP12314 374 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 GDF5P43026 501 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 ABATP80404 500 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 NFATC4Q14934 902 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 FAM92BQ6ZTR7 304 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 KCT2Q8NC54 265 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 HCAR2Q8TDS4 363 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 KIAA1191Q96A73 305 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 DACT3Q96B18 629 aaPredicted RBP9.02□□□□□ -0.97
PTPRE-202ENST00000306042 ART5Q96L15 291 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 OLFM3Q96PB7 478 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 BTBD9Q96Q07 612 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 CDRT15Q96T59 188 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 WDR55Q9H6Y2 383 aaPredicted RBP9.02□□□□□ -0.97
PTPRE-202ENST00000306042 GAREM1Q9H706 876 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 IL26Q9NPH9 171 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 IL17CQ9P0M4 197 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 WNT16Q9UBV4 365 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 PHF11Q9UIL8 331 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 SUFUQ9UMX1 484 aa9.02□□□□□ -0.97
PTPRE-202ENST00000306042 PDPK1O15530 556 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 NPHS1O60500 1241 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 LDOC1O95751 146 aaPredicted RBP9.01□□□□□ -0.97
PTPRE-202ENST00000306042 IMPDH1P20839 514 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 E2F1Q01094 437 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 TBCELQ5QJ74 424 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 IQCKQ8N0W5 287 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 ARFGAP1Q8N6T3 406 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 CENPTQ96BT3 561 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 C12orf65Q9H3J6 166 aaKnown RBP9.01□□□□□ -0.97
PTPRE-202ENST00000306042 IL21Q9HBE4 155 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 POPDC3Q9HBV1 291 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 SLCO1B3Q9NPD5 702 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 ADAP2Q9NPF8 381 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 MAT2BQ9NZL9 334 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 PPIEQ9UNP9 301 aaKnown RBP9.01□□□□□ -0.97
PTPRE-202ENST00000306042 PCDHGA4Q9Y5G9 962 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 SPO11Q9Y5K1 396 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 KIR2DS5A0A0G2JLQ3 304 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 A0A0G2JNG1 304 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 DYTNA2CJ06 578 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 C5orf67F2Z3F1 127 aa9.01□□□□□ -0.97
PTPRE-202ENST00000306042 KIR2DS3K7RE56 304 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms