RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 MYO10Q9HD67 2058 aa14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 A0A1W2PP18 115 aa14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 E7EQ34 232 aa14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 KIF1CO43896 1103 aaKnown RBP14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 PCNAP12004 261 aa14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 CD72P21854 359 aa14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 RPL10P27635 214 aaKnown RBP14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 MAPK1P28482 360 aa14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 SLC7A2P52569 658 aa14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 SMAD4Q13485 552 aaKnown RBP14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 ZXDCQ2QGD7 858 aaPredicted RBP14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 LIX1Q8N485 282 aa14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 PHC3Q8NDX5 983 aa14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 FLCNQ8NFG4 579 aa14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 USP7Q93009 1102 aa14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 SH3KBP1Q96B97 665 aa14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 HOPXQ9BPY8 73 aaPredicted RBP14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 SLC39A3Q9BRY0 314 aa14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 TEX101Q9BY14 249 aa14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 STX18Q9P2W9 335 aaKnown RBP14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 GPSM3Q9Y4H4 160 aa14.09□□□□□ -0.15
SHCBP1-201ENST00000303383 UGDHO60701 494 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 MYCLP1P12525 358 aaPredicted RBP14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 HNF4AP41235 474 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 TBPL1P62380 186 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 CEACAM7Q14002 265 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 UNC5DQ6UXZ4 953 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 HACD2Q6Y1H2 254 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 FAM83HQ6ZRV2 1179 aaPredicted RBP14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 PDZD3Q86UT5 571 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 GALNT13Q8IUC8 556 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 ZNF480Q8WV37 535 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 SGK2Q9HBY8 427 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 CCDC177Q9NQR7 707 aaPredicted RBP14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 CFAP20Q9Y6A4 193 aaKnown RBP14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 DNMT3AQ9Y6K1 912 aaPredicted RBP14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 TMEM265A0A087WTH1 108 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 GPR89AB7ZAQ6 455 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 GPR89BP0CG08 455 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 XRCC1P18887 633 aaPredicted RBP14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 KELP23276 732 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 DOC2AQ14183 400 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 AGERQ15109 404 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 SPATA24Q86W54 205 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 TP53I13Q8NBR0 393 aaPredicted RBP14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 FBXO15Q8NCQ5 510 aaPredicted RBP14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 RSRC1Q96IZ7 334 aaKnown RBP14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 TEX37Q96LM6 180 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 ACPTQ9BZG2 426 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 UBE2ZQ9H832 354 aaPredicted RBP14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 TM7SF3Q9NS93 570 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 ST14Q9Y5Y6 855 aa14.08□□□□□ -0.16
SHCBP1-201ENST00000303383 TCRBV21S2A2A0A5A6 115 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 DYTNA2CJ06 578 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 MBTPS2O43462 519 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 PTDSS1P48651 473 aaKnown RBP14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 CLCNKAP51800 687 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 RCAN2Q14206 197 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 FGL2Q14314 439 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 HIST2H2ACQ16777 129 aaPredicted RBP14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 ZNF423Q2M1K9 1284 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 SMU1Q2TAY7 513 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 LRIT3Q3SXY7 679 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 HIST2H2AA3Q6FI13 130 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 AAGABQ6PD74 315 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 ZFAND4Q86XD8 727 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 DCUN1D3Q8IWE4 304 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 FAM9CQ8IZT9 166 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 RAB42Q8N4Z0 105 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 FAM156AQ8NDB6 213 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 OR56A3Q8NH54 315 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 SLC23A2Q9UGH3 650 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 FZD4Q9ULV1 537 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 DPP6P42658 865 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 CAPRIN1Q14444 709 aaKnown RBP14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 MUM1Q2TAK8 710 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 C11orf96Q7Z7L8 435 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 RETREG3Q86VR2 466 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 PROKR1Q8TCW9 393 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 HMGB4Q8WW32 186 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 LRGUKQ96M69 825 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 MTERF1Q99551 399 aaKnown RBP14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 PHF7Q9BWX1 381 aaPredicted RBP14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 PCDHGA11Q9Y5H2 935 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 DOCK9Q9BZ29 2069 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 SZT2Q5T011 3432 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 KLHL33A6NCF5 533 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 RSL1D1O76021 490 aaKnown RBP14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 MYO1DO94832 1006 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 POU3F3P20264 500 aaPredicted RBP14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 TRIM23P36406 574 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 PNLIPRP1P54315 467 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 PTGR1Q14914 329 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 COQ5Q5HYK3 327 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 C6orf10Q5SRN2 563 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 SUSD1Q6UWL2 747 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 USP30Q70CQ3 517 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 RASGRP3Q8IV61 690 aa14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 C2orf73Q8N5S3 287 aaPredicted RBP14.07□□□□□ -0.16
SHCBP1-201ENST00000303383 BHLHE22Q8NFJ8 381 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms