RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 CACNG1Q06432 222 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 C9orf57Q5W0N0 161 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 GPAT4Q86UL3 456 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 OR52J3Q8NH60 311 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 THEM6Q8WUY1 208 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 AUTS2Q8WXX7 1259 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 NUDT4Q9NZJ9 180 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 PCDHGB1Q9Y5G3 927 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 AP4B1Q9Y6B7 739 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 DGKBQ9Y6T7 804 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 TEX13DA0A0J9YY54 714 aaPredicted RBP11.84□□□□□ -0.51
PCF11-201ENST00000298281 ELOA3DA6NLF2 546 aaPredicted RBP11.84□□□□□ -0.51
PCF11-201ENST00000298281 ZBTB22O15209 634 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 LYPLA2O95372 231 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 FCER2P06734 321 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 ELOA3BQ3SY89 546 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 GCNT6Q5T4J0 391 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 TMED4Q7Z7H5 227 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 SLCO6A1Q86UG4 719 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 TNS4Q8IZW8 715 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 CFAP52Q8N1V2 620 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 PLA2G15Q8NCC3 412 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 ELOA3Q8NG57 546 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 HINT2Q9BX68 163 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 ASPNQ9BXN1 380 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 METTL7AQ9H8H3 244 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 AGO3Q9H9G7 860 aaKnown RBP11.84□□□□□ -0.51
PCF11-201ENST00000298281 PCDHGB2Q9Y5G2 931 aa11.84□□□□□ -0.51
PCF11-201ENST00000298281 TMEM150CB9EJG8 249 aa11.83□□□□□ -0.51
PCF11-201ENST00000298281 CDK14O94921 469 aa11.83□□□□□ -0.51
PCF11-201ENST00000298281 BPGMP07738 259 aa11.83□□□□□ -0.51
PCF11-201ENST00000298281 TACSTD2P09758 323 aa11.83□□□□□ -0.51
PCF11-201ENST00000298281 BCKDHAP12694 445 aa11.83□□□□□ -0.51
PCF11-201ENST00000298281 IFI30P13284 250 aa11.83□□□□□ -0.51
PCF11-201ENST00000298281 HNRNPLP14866 589 aaKnown RBP eCLIP11.83□□□□□ -0.51
PCF11-201ENST00000298281 OR1D2P34982 312 aa11.83□□□□□ -0.51
PCF11-201ENST00000298281 DLSTP36957 453 aa11.83□□□□□ -0.51
PCF11-201ENST00000298281 DPYSL2Q16555 572 aa11.83□□□□□ -0.51
PCF11-201ENST00000298281 Q8N9G6 341 aaPredicted RBP11.83□□□□□ -0.51
PCF11-201ENST00000298281 PTERQ96BW5 349 aa11.83□□□□□ -0.51
PCF11-201ENST00000298281 ZNF578Q96N58 590 aaPredicted RBP11.83□□□□□ -0.51
PCF11-201ENST00000298281 CLPXO76031 633 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 ITPKAP23677 461 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 LUMP51884 338 aaPredicted RBP11.83□□□□□ -0.52
PCF11-201ENST00000298281 MAXP61244 160 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 MLLT1Q03111 559 aaPredicted RBP11.83□□□□□ -0.52
PCF11-201ENST00000298281 TIGD2Q4W5G0 525 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 SLC44A3Q8N4M1 653 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 AGAP11Q8TF27 550 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 LCN9Q8WX39 176 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 EMID1Q96A84 441 aaPredicted RBP11.83□□□□□ -0.52
PCF11-201ENST00000298281 ORAI3Q9BRQ5 295 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 TTYH2Q9BSA4 534 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 SRMSQ9H3Y6 488 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 DDX4Q9NQI0 724 aaKnown RBP11.83□□□□□ -0.52
PCF11-201ENST00000298281 RNF19AQ9NV58 838 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 MAN2B2Q9Y2E5 1009 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 AURKAO14965 403 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 IFNW1P05000 195 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 RHOQP17081 205 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 CD52P31358 61 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 HNRNPH3P31942 346 aaKnown RBP11.83□□□□□ -0.52
PCF11-201ENST00000298281 ROR2Q01974 943 aaKnown RBP11.83□□□□□ -0.52
PCF11-201ENST00000298281 DNM1P34Q6PK57 102 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 GPR151Q8TDV0 419 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 ZNF570Q96NI8 536 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 WASF2Q9Y6W5 498 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 KIF20BQ96Q89 1820 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 IQCF5A8MTL0 148 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 C1RP00736 705 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 VAMP1P23763 118 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 ADRA1BP35368 520 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 POLR2JP52435 117 aaKnown RBP11.83□□□□□ -0.52
PCF11-201ENST00000298281 EARS2Q5JPH6 523 aaKnown RBP11.83□□□□□ -0.52
PCF11-201ENST00000298281 TRABD2AQ86V40 505 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 ADAD1Q96M93 576 aaKnown RBP11.83□□□□□ -0.52
PCF11-201ENST00000298281 NADKO95544 446 aaPredicted RBP11.83□□□□□ -0.52
PCF11-201ENST00000298281 HOXB9P17482 250 aaPredicted RBP11.83□□□□□ -0.52
PCF11-201ENST00000298281 NR4A1P22736 598 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 GBX2P52951 348 aaPredicted RBP11.83□□□□□ -0.52
PCF11-201ENST00000298281 NRG1Q02297 640 aaPredicted RBP11.83□□□□□ -0.52
PCF11-201ENST00000298281 HEPACAMQ14CZ8 416 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 LRRC55Q6ZSA7 311 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 DEFB132Q7Z7B7 95 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 SLC30A8Q8IWU4 369 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 ZFPM1Q8IX07 1006 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 GCDHQ92947 438 aaPredicted RBP11.83□□□□□ -0.52
PCF11-201ENST00000298281 OR5B12Q96R08 314 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 TIMMDC1Q9NPL8 285 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 TAS2R14Q9NYV8 317 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 PCTPQ9UKL6 214 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 CNOT11Q9UKZ1 510 aaKnown RBP11.83□□□□□ -0.52
PCF11-201ENST00000298281 NOP16Q9Y3C1 178 aaKnown RBP11.83□□□□□ -0.52
PCF11-201ENST00000298281 IFNA10P01566 189 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 CCR10P46092 362 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 SEMA5AQ13591 1074 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 UBAP2LQ14157 1087 aaKnown RBP11.83□□□□□ -0.52
PCF11-201ENST00000298281 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.83□□□□□ -0.523e-16■■■■■ 27.9
PCF11-201ENST00000298281 LCLAT1Q6UWP7 414 aa11.83□□□□□ -0.52
PCF11-201ENST00000298281 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms