RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 CCDC154A6NI56 674 aa20.75■□□□□ 0.91
SOX17-201ENST00000297316 PLRG1O43660 514 aaKnown RBP20.75■□□□□ 0.91
SOX17-201ENST00000297316 ULK1O75385 1050 aa20.75■□□□□ 0.91
SOX17-201ENST00000297316 CLDN9O95484 217 aa20.75■□□□□ 0.91
SOX17-201ENST00000297316 IRX1P78414 480 aaPredicted RBP20.75■□□□□ 0.91
SOX17-201ENST00000297316 SMAD4Q13485 552 aaKnown RBP20.75■□□□□ 0.91
SOX17-201ENST00000297316 TRIP10Q15642 601 aa20.75■□□□□ 0.91
SOX17-201ENST00000297316 SFT2D3Q587I9 215 aa20.75■□□□□ 0.91
SOX17-201ENST00000297316 COQ5Q5HYK3 327 aa20.75■□□□□ 0.91
SOX17-201ENST00000297316 CYP2R1Q6VVX0 501 aa20.75■□□□□ 0.91
SOX17-201ENST00000297316 TRIM46Q7Z4K8 759 aa20.75■□□□□ 0.91
SOX17-201ENST00000297316 ZFAND4Q86XD8 727 aa20.75■□□□□ 0.91
SOX17-201ENST00000297316 TP53I13Q8NBR0 393 aaPredicted RBP20.75■□□□□ 0.91
SOX17-201ENST00000297316 ECSITQ9BQ95 431 aa20.75■□□□□ 0.91
SOX17-201ENST00000297316 C8orf33Q9H7E9 229 aaPredicted RBP20.75■□□□□ 0.91
SOX17-201ENST00000297316 FAM234BA2RU67 622 aa20.74■□□□□ 0.91
SOX17-201ENST00000297316 VEGFDO43915 354 aa20.74■□□□□ 0.91
SOX17-201ENST00000297316 EEDO75530 441 aaKnown RBP20.74■□□□□ 0.91
SOX17-201ENST00000297316 MAP4P27816 1152 aaKnown RBP20.74■□□□□ 0.91
SOX17-201ENST00000297316 PFN3P60673 137 aa20.74■□□□□ 0.91
SOX17-201ENST00000297316 PPP2CBP62714 309 aa20.74■□□□□ 0.91
SOX17-201ENST00000297316 PPP2CAP67775 309 aa20.74■□□□□ 0.91
SOX17-201ENST00000297316 NFYCQ13952 458 aa20.74■□□□□ 0.91
SOX17-201ENST00000297316 TRMT11Q7Z4G4 463 aaKnown RBP20.74■□□□□ 0.91
SOX17-201ENST00000297316 TCAIMQ8N3R3 496 aa20.74■□□□□ 0.91
SOX17-201ENST00000297316 TSPEARQ8WU66 669 aa20.74■□□□□ 0.91
SOX17-201ENST00000297316 SIPA1Q96FS4 1042 aa20.74■□□□□ 0.91
SOX17-201ENST00000297316 PKP4Q99569 1192 aa20.74■□□□□ 0.91
SOX17-201ENST00000297316 HOPXQ9BPY8 73 aaPredicted RBP20.74■□□□□ 0.91
SOX17-201ENST00000297316 INTS7Q9NVH2 962 aaKnown RBP20.74■□□□□ 0.91
SOX17-201ENST00000297316 TBC1D3DA0A087WVF3 549 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 TBC1D3IA0A087WXS9 549 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 TBC1D3EA0A087X179 549 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 TBC1D3KA0A087X1G2 549 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 TBC1D3FA6NER0 549 aaPredicted RBP20.73■□□□□ 0.91
SOX17-201ENST00000297316 TBC1D3LB9A6J9 549 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 RNGTTO60942 597 aaKnown RBP20.73■□□□□ 0.91
SOX17-201ENST00000297316 TBC1D3HP0C7X1 549 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 AP1S2P56377 157 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 PTGR1Q14914 329 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 TBC1D3GQ6DHY5 549 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 TBC1D3CQ6IPX1 549 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 SLC2A7Q6PXP3 512 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 TBC1D3Q8IZP1 549 aaPredicted RBP20.73■□□□□ 0.91
SOX17-201ENST00000297316 CHCHD4Q8N4Q1 142 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 PPP3R2Q96LZ3 170 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 LRCH1Q9Y2L9 728 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 TMEM265A0A087WTH1 108 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 PRSS51A0A1B0GVH4 220 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 CASQ2O14958 399 aaPredicted RBP20.73■□□□□ 0.91
SOX17-201ENST00000297316 RGS14O43566 566 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 SLC16A8O95907 504 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 PDYNP01213 254 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 FUCA1P04066 466 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 CASP2P42575 452 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 HNMTP50135 292 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 NEK2P51955 445 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 RPS21P63220 83 aaKnown RBP20.73■□□□□ 0.91
SOX17-201ENST00000297316 TFF2Q03403 129 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 TMEM259Q4ZIN3 620 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 RABL3Q5HYI8 236 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 RNF165Q6ZSG1 346 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 FAM131CQ96AQ9 280 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 MRGPRX1Q96LB2 322 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 LINC00615Q96LM1 132 aaPredicted RBP20.73■□□□□ 0.91
SOX17-201ENST00000297316 C1QTNF2Q9BXJ5 285 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 SLC29A3Q9BZD2 475 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 ACPTQ9BZG2 426 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 COPS7BQ9H9Q2 264 aaPredicted RBP20.73■□□□□ 0.91
SOX17-201ENST00000297316 STOX2Q9P2F5 926 aaPredicted RBP20.73■□□□□ 0.91
SOX17-201ENST00000297316 RIMS3Q9UJD0 308 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 GPR34Q9UPC5 381 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 PCDHA9Q9Y5H5 950 aa20.73■□□□□ 0.91
SOX17-201ENST00000297316 SLC28A1O00337 649 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 ATP6V1B2P21281 511 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 DGKQP52824 942 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 FLCNQ8NFG4 579 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 OR2L2Q8NH16 312 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 DNAJB14Q8TBM8 379 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 DNASE1L2Q92874 299 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 TMEM125Q96AQ2 219 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 FBXL8Q96CD0 374 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 PHF7Q9BWX1 381 aaPredicted RBP20.72■□□□□ 0.91
SOX17-201ENST00000297316 TEX101Q9BY14 249 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 SLC17A9Q9BYT1 436 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 MRPL40Q9NQ50 206 aaKnown RBP20.72■□□□□ 0.91
SOX17-201ENST00000297316 GID8Q9NWU2 228 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 NDRG2Q9UN36 371 aaKnown RBP20.72■□□□□ 0.91
SOX17-201ENST00000297316 SLC31A1O15431 190 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 C1orf105O95561 183 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 CATP04040 527 aaKnown RBP20.72■□□□□ 0.91
SOX17-201ENST00000297316 C8BP07358 591 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 IMPA1P29218 277 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 PRKG2Q13237 762 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 SGCGQ13326 291 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 NAE1Q13564 534 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 ZFP1Q6P2D0 407 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 TMEM154Q6P9G4 183 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 AGTRAPQ6RW13 159 aa20.72■□□□□ 0.91
SOX17-201ENST00000297316 KIAA1324Q6UXG2 1013 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms