RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 BEND7Q8N7W2 519 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 OR5K1Q8NHB7 308 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 GTF2H4Q92759 462 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 FOXJ1Q92949 421 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 NUSAP1Q9BXS6 441 aaKnown RBP12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 SIAEQ9HAT2 523 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 TAS2R16Q9NYV7 291 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 EHD3Q9NZN3 535 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 DNMT3LQ9UJW3 386 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 DUSP12Q9UNI6 340 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 TBKBP1A7MCY6 615 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 EPN2O95208 641 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 ANXA5P08758 320 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 GJA1P17302 382 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 HOXB8P17481 243 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 KIR3DL1P43629 444 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 COPZ1P61923 177 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 BCL2L1Q07817 233 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 RFLNAQ6ZTI6 216 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 DEFB128Q7Z7B8 93 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 TSPAN33Q86UF1 283 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 LGALS12Q96DT0 336 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 COPS4Q9BT78 406 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 BEX2Q9BXY8 128 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 ALOXE3Q9BYJ1 711 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 CEP44Q9C0F1 390 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 CTPS2Q9NRF8 586 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 SCML2Q9UQR0 700 aa12.99□□□□□ -0.33
TNFRSF21-201ENST00000296861 ASNA1O43681 348 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 NUDT7P0C024 238 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 BMP4P12644 408 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 TYMPP19971 482 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 DGKAP23743 735 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 DNAJB1P25685 340 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 RBM48Q5RL73 367 aaKnown RBP12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 XAF1Q6GPH4 301 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 TMC5Q6UXY8 1006 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 Q96MT0 163 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 MED16Q9Y2X0 877 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 UNC80Q8N2C7 3258 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 TPST2O60704 377 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 KRT75O95678 551 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 CAPNS1P04632 268 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 GRK3P35626 688 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 SLC26A3P40879 764 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 GP2P55259 537 aaKnown RBP12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 CDH12P55289 794 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 FOXM1Q08050 763 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 ACSM2AQ08AH3 577 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 STARD3Q14849 445 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 CLCA4Q14CN2 919 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 CARD16Q5EG05 197 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 ACSM2BQ68CK6 577 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 SCAIQ8N9R8 606 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 SETD9Q8NE22 299 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 AUTS2Q8WXX7 1259 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 HDAC2Q92769 488 aaKnown RBP12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 SH3KBP1Q96B97 665 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 IL4I1Q96RQ9 567 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 ZNF382Q96SR6 550 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 WDR12Q9GZL7 423 aaKnown RBP12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 NUAK2Q9H093 628 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 PAK1IP1Q9NWT1 392 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 VNN3Q9NY84 501 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 CDH23Q9H251 3354 aa12.98□□□□□ -0.33
TNFRSF21-201ENST00000296861 MGAT4DA6NG13 374 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 H0YAE9 185 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 CLIC1O00299 241 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 OR7A17O14581 309 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 PDYNP01213 254 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 APOA1P02647 267 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 SERPIND1P05546 499 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 GSTM2P28161 218 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 FAM214AQ32MH5 1076 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 CATSPEREQ5SY80 951 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 MFSD14CQ5VZR4 134 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 CCDC80Q76M96 950 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 NLGN4XQ8N0W4 816 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 OSBPL10Q9BXB5 764 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 ATP13A3Q9H7F0 1226 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 SLC25A37Q9NYZ2 338 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 LCTP09848 1927 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 FLT3LGP49771 235 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 SMARCB1Q12824 385 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 CHIT1Q13231 466 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 TCEA2Q15560 299 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 XKR6Q5GH73 641 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 HECTD3Q5T447 861 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 CST9Q5W186 159 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 PDPRQ8NCN5 879 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 OR4K1Q8NGD4 311 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 BPIFB1Q8TDL5 484 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 PYURFQ96I23 114 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 ALPK1Q96QP1 1244 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 COPS8Q99627 209 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 ACTL8Q9H568 366 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 TRPM5Q9NZQ8 1165 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 BPTFQ12830 3046 aa12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 SMAD6O43541 496 aaKnown RBP12.97□□□□□ -0.33
TNFRSF21-201ENST00000296861 PRSS23O95084 383 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms