RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 CYP2R1Q6VVX0 501 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 GALNT13Q8IUC8 556 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 FAM9CQ8IZT9 166 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 HDDC3Q8N4P3 179 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 OXR1Q8N573 874 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 ZUFSPQ96AP4 578 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 MTFMTQ96DP5 389 aaKnown RBP8.89□□□□□ -0.99
PDPN-201ENST00000294489 SLC45A3Q96JT2 553 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 DPY30Q9C005 99 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 MKRN2Q9H000 416 aaKnown RBP8.89□□□□□ -0.99
PDPN-201ENST00000294489 SLC2A4RGQ9NR83 387 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 CMTM6Q9NX76 183 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 ASIC5Q9NY37 505 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 DTNAQ9Y4J8 743 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 PIAS3Q9Y6X2 628 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 KCNE1BA0A087WTH5 132 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 TCRBV3S1A0A5B6 114 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 ASPDHA6ND91 283 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 ARHGEF33A8MVX0 844 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 H3BM21 787 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 PCSK2P16519 638 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 ZNF8P17098 575 aaPredicted RBP8.89□□□□□ -0.99
PDPN-201ENST00000294489 ITPKAP23677 461 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 VARSP26640 1264 aaKnown RBP8.89□□□□□ -0.99
PDPN-201ENST00000294489 PBLDP30039 288 aaPredicted RBP8.89□□□□□ -0.99
PDPN-201ENST00000294489 HALP42357 657 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 WASP42768 502 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 PREPP48147 710 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 MRPS35P82673 323 aaKnown RBP8.89□□□□□ -0.99
PDPN-201ENST00000294489 PLOD1Q02809 727 aaPredicted RBP8.89□□□□□ -0.99
PDPN-201ENST00000294489 E2F2Q14209 437 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 FGL2Q14314 439 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 ANO7Q6IWH7 933 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.89□□□□□ -0.99
PDPN-201ENST00000294489 USP30Q70CQ3 517 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 TRAPPC5Q8IUR0 188 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 DPP10Q8N608 796 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 ADCY4Q8NFM4 1077 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 OR2T34Q8NGX1 318 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 OR2L2Q8NH16 312 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 VCXQ9H320 206 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 MUC13Q9H3R2 512 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 ALG2Q9H553 416 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 PCDHA9Q9Y5H5 950 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 PRR19A6NJB7 356 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 NPIPB8E9PQR5 432 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 ANKRD28O15084 1053 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 UGDHO60701 494 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 DNAJA2O60884 412 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 PDYNP01213 254 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 SLC7A1P30825 629 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 CHIT1Q13231 466 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.88□□□□□ -0.99
PDPN-201ENST00000294489 HID1Q8IV36 788 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 ZNF687Q8N1G0 1237 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 LIX1Q8N485 282 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 TMEM125Q96AQ2 219 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 DUS3LQ96G46 650 aaKnown RBP8.88□□□□□ -0.99
PDPN-201ENST00000294489 PHF7Q9BWX1 381 aaPredicted RBP8.88□□□□□ -0.99
PDPN-201ENST00000294489 ACPTQ9BZG2 426 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 DPEP2Q9H4A9 486 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 ACTL8Q9H568 366 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 PREBQ9HCU5 417 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 ACTR3BQ9P1U1 418 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 RIMS3Q9UJD0 308 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 A0A1W2PP55 124 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 KLHL33A6NCF5 533 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 AQP12BA6NM10 295 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 RSL1D1O76021 490 aaKnown RBP8.88□□□□□ -0.99
PDPN-201ENST00000294489 KLF8O95600 359 aaPredicted RBP8.88□□□□□ -0.99
PDPN-201ENST00000294489 HOXC4P09017 264 aaPredicted RBP8.88□□□□□ -0.99
PDPN-201ENST00000294489 ACADLP28330 430 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 MAPK1P28482 360 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 GRIA3P42263 894 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 EEFSECP57772 596 aaKnown RBP8.88□□□□□ -0.99
PDPN-201ENST00000294489 PFN3P60673 137 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 RPS21P63220 83 aaKnown RBP8.88□□□□□ -0.99
PDPN-201ENST00000294489 CDK3Q00526 305 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 IRF8Q02556 426 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 GRSF1Q12849 480 aaKnown RBP eCLIP8.88□□□□□ -0.99
PDPN-201ENST00000294489 RPA4Q13156 261 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 BLMHQ13867 455 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 CCINQ13939 588 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 INPP5AQ14642 412 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 PTGR1Q14914 329 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 AASDHQ4L235 1098 aaPredicted RBP8.88□□□□□ -0.99
PDPN-201ENST00000294489 SFT2D3Q587I9 215 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 LIPJQ5W064 366 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 FRG2Q64ET8 278 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 SDE2Q6IQ49 451 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 SLC2A7Q6PXP3 512 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 AGTRAPQ6RW13 159 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 THOC6Q86W42 341 aaKnown RBP8.88□□□□□ -0.99
PDPN-201ENST00000294489 AQP12AQ8IXF9 295 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 GOLM1Q8NBJ4 401 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 FRG2BQ96QU4 278 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 NR1H4Q96RI1 486 aaPredicted RBP8.88□□□□□ -0.99
PDPN-201ENST00000294489 PKP2Q99959 881 aa8.88□□□□□ -0.99
PDPN-201ENST00000294489 KCTD14Q9BQ13 255 aaPredicted RBP8.88□□□□□ -0.99
PDPN-201ENST00000294489 TRPM6Q9BX84 2022 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms