RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 UPK1AO00322 258 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 SERPINA1P01009 418 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 SDC1P18827 310 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 ALDH3B2P48448 385 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 CCSMST1Q4G0I0 132 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 NETO1Q8TDF5 533 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 TOX2Q96NM4 488 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 MCCC1Q96RQ3 725 aaPredicted RBP15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 SLC12A9Q9BXP2 914 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 PCDH12Q9NPG4 1184 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 EXD2Q9NVH0 621 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 TRIM43BA6NCK2 446 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 ZNF682O95780 498 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 SHMT2P34897 504 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 VAC14Q08AM6 782 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 SPIDRQ14159 915 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 LRRC26Q2I0M4 334 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 PATL1Q86TB9 770 aaKnown RBP15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 MCOLN3Q8TDD5 553 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 IRF7Q92985 503 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 TRIM43Q96BQ3 446 aaPredicted RBP15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 PAWRQ96IZ0 340 aaKnown RBP15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 LMLNQ96KR4 655 aa15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 WRAP53Q9BUR4 548 aaKnown RBP15.38■□□□□ 0.05
NCKIPSD-201ENST00000294129 FOXD2O60548 495 aaPredicted RBP15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 TULP3O75386 442 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 CBSLP0DN79 551 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 IL7RP16871 459 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 CYP2A7P20853 494 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 CBSP35520 551 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 IRF8Q02556 426 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 SLC14A1Q13336 389 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 DAG1Q14118 895 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 SYTL3Q4VX76 610 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 XKR6Q5GH73 641 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 GPR107Q5VW38 600 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 DOK6Q6PKX4 331 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 TRIM74Q86UV6 250 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 GLB1L3Q8NCI6 653 aaPredicted RBP15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 OR7A2PQ8NGA2 310 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 UGT2B28Q9BY64 529 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 TDP1Q9NUW8 608 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 DNAJC11Q9NVH1 559 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 TSPAN6O43657 245 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 CPSF4O95639 269 aaKnown RBP15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 THRBP10828 461 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 CLCN2P51788 898 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 PMS2P3Q13401 168 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 KCTD21Q4G0X4 260 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 TMEM259Q4ZIN3 620 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 RUNDC3AQ59EK9 446 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 LILRA6Q6PI73 481 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 ADIPOR2Q86V24 386 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 MICU2Q8IYU8 434 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 SGCDQ92629 289 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 EMILIN2Q9BXX0 1053 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 TOR3AQ9H497 397 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 NOTCH4Q99466 2003 aa15.37■□□□□ 0.05
NCKIPSD-201ENST00000294129 FADS2P1A8MWK0 482 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 RFXANKO14593 260 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 CREG1O75629 220 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 C8GP07360 202 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 POLR2EP19388 210 aaKnown RBP15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 MAP4P27816 1152 aaKnown RBP15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 BDKRB1P46663 353 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 CTSCP53634 463 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 NAE1Q13564 534 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 PON2Q15165 354 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 FRG2Q64ET8 278 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 LRRC70Q7Z2Q7 622 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 NECAB2Q7Z6G3 386 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 ZSWIM3Q96MP5 696 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 FRG2BQ96QU4 278 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 SLC29A3Q9BZD2 475 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 PAIP1Q9H074 479 aaKnown RBP15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 CFAP99D6REC4 459 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 HS6ST1O60243 411 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 DIRAS1O95057 198 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 ALDH3A2P51648 485 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 POLR2LP62875 67 aaKnown RBP15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 FXNQ16595 210 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 KCTD8Q6ZWB6 473 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 SPRED2Q7Z698 418 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 GPR180Q86V85 440 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 SYT12Q8IV01 421 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 ZNF641Q96N77 438 aaPredicted RBP15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 KAT8Q9H7Z6 458 aaKnown RBP15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 SPHK2Q9NRA0 654 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 RHBDL2Q9NX52 303 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 LMCD1Q9NZU5 365 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 IFT80Q9P2H3 777 aaPredicted RBP15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 VPS4AQ9UN37 437 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 COQ6Q9Y2Z9 468 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 GRXCR2A6NFK2 248 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 E7EQ34 232 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 PFDN1O60925 122 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 BMP10O95393 424 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 ALPLP05186 524 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 CDK4P11802 303 aa15.36■□□□□ 0.05
NCKIPSD-201ENST00000294129 CDK9P50750 372 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms