RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 PCYT2Q99447 389 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 C11orf49Q9H6J7 331 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 CRTAC1Q9NQ79 661 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 SLC2A6Q9UGQ3 507 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 POFUT2Q9Y2G5 429 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 MTMR11A4FU01 709 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 E7ESA3 106 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 SIX3O95343 332 aaPredicted RBP12.51□□□□□ -0.41
PTCD1-201ENST00000292478 SERPINA3P01011 423 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 MYCLP1P12525 358 aaPredicted RBP12.51□□□□□ -0.41
PTCD1-201ENST00000292478 IL7RP16871 459 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 ATP5A1P25705 553 aaKnown RBP12.51□□□□□ -0.41
PTCD1-201ENST00000292478 GRK6P43250 576 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 RING1Q06587 406 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 PITRM1Q5JRX3 1037 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 CEP68Q76N32 757 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 ABHD13Q7L211 337 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 GOLGA7Q7Z5G4 137 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 OR10G2Q8NGC3 310 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 TUBA8Q9NY65 449 aaPredicted RBP12.51□□□□□ -0.41
PTCD1-201ENST00000292478 SIRPGQ9P1W8 387 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 EI24O14681 340 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 SLC22A1O15245 554 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 ALPIP09923 528 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 FPGSQ05932 587 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 ATCAYQ86WG3 371 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 MEIOBQ8N635 442 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 ZNF461Q8TAF7 563 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 LRRC15Q8TF66 581 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 SMPDL3AQ92484 453 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 SCLYQ96I15 445 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 PHF12Q96QT6 1004 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 CHCHD6Q9BRQ6 235 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 PCDHAC1Q9H158 963 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 ABCG4Q9H172 646 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 COPS7AQ9UBW8 275 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 RGPD8O14715 1765 aaPredicted RBP12.5□□□□□ -0.41
PTCD1-201ENST00000292478 PDCD5O14737 125 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 TYROBPO43914 113 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 TBX10O75333 385 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 PRAMEF12O95522 483 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 SNAI1O95863 264 aaPredicted RBP12.5□□□□□ -0.41
PTCD1-201ENST00000292478 KCNQ1P51787 676 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 NCBP2P52298 156 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTCD1-201ENST00000292478 PDE12Q6L8Q7 609 aaKnown RBP12.5□□□□□ -0.41
PTCD1-201ENST00000292478 RANBP9Q96S59 729 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 MAGEE1Q9HCI5 957 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 FZD4Q9ULV1 537 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 PCDHGB1Q9Y5G3 927 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 E7ENX8 843 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 MATN2O00339 956 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 ONECUT3O60422 494 aaPredicted RBP12.5□□□□□ -0.41
PTCD1-201ENST00000292478 SOCS5O75159 536 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 NRLP54845 237 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 FRMD7Q6ZUT3 714 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 ZMIZ2Q8NF64 920 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 POLR2J3Q9H1A7 115 aaKnown RBP12.5□□□□□ -0.41
PTCD1-201ENST00000292478 CIDEBQ9UHD4 219 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 PPIEQ9UNP9 301 aaKnown RBP12.5□□□□□ -0.41
PTCD1-201ENST00000292478 CICQ96RK0 1608 aaPredicted RBP12.5□□□□□ -0.41
PTCD1-201ENST00000292478 TP73O15350 636 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 PRMT3O60678 531 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 ENGP17813 658 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 XRCC1P18887 633 aaPredicted RBP12.5□□□□□ -0.41
PTCD1-201ENST00000292478 SLC11A1P49279 550 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 PLA2G16P53816 162 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 PLEKHG6Q3KR16 790 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 C15orf39Q6ZRI6 1047 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 ADGRD2Q7Z7M1 963 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 THOC6Q86W42 341 aaKnown RBP12.5□□□□□ -0.41
PTCD1-201ENST00000292478 ZUFSPQ96AP4 578 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 PIWIL1Q96J94 861 aaKnown RBP12.5□□□□□ -0.41
PTCD1-201ENST00000292478 SLC38A3Q99624 504 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 SLC35A5Q9BS91 424 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 DGKBQ9Y6T7 804 aa12.5□□□□□ -0.41
PTCD1-201ENST00000292478 RHDQ02161 417 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 ABHD18Q0P651 414 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 SUZ12Q15022 739 aaKnown RBP12.49□□□□□ -0.41
PTCD1-201ENST00000292478 SATL1Q86VE3 508 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 IFNLR1Q8IU57 520 aaPredicted RBP12.49□□□□□ -0.41
PTCD1-201ENST00000292478 OR4F6Q8NGB9 312 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 TMCO6Q96DC7 493 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 DPEP2Q9H4A9 486 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 C11orf16Q9NQ32 467 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 GALPQ9UBC7 116 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 TRBV23OR9-2A0A075B6M9 112 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 BCAS2O75934 225 aaPredicted RBP12.49□□□□□ -0.41
PTCD1-201ENST00000292478 EDNRBP24530 442 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 TLE2Q04725 743 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 LRRC32Q14392 662 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 SNAP47Q5SQN1 464 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 ZNF678Q5SXM1 525 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 RBM20Q5T481 1227 aaKnown RBP12.49□□□□□ -0.41
PTCD1-201ENST00000292478 CXorf57Q6NSI4 855 aaKnown RBP12.49□□□□□ -0.41
PTCD1-201ENST00000292478 ZCCHC10Q8TBK6 192 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 CDK15Q96Q40 435 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 COMMD4Q9H0A8 199 aa12.49□□□□□ -0.41
PTCD1-201ENST00000292478 CHD2O14647 1828 aaKnown RBP12.49□□□□□ -0.41
PTCD1-201ENST00000292478 OAS1P00973 400 aaKnown RBP12.49□□□□□ -0.41
PTCD1-201ENST00000292478 SOD2P04179 222 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms