RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 TMEM156Q8N614 296 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 FAM13CQ8NE31 585 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 TMEM40Q8WWA1 233 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 DGAT2Q96PD7 388 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 ADAMTS5Q9UNA0 930 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 DNAJC25-GNG10A0A024R161 153 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 FAM92AA1XBS5 289 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 ZNF487B1APH4 448 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 BDKRB1P46663 353 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 THOC6Q86W42 341 aaKnown RBP18.11■□□□□ 0.49
PCDH1-201ENST00000287008 UBASH3BQ8TF42 649 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 AP3S1Q92572 193 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 SPATA7Q9P0W8 599 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 ACSL5Q9ULC5 683 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 GNEQ9Y223 722 aaKnown RBP18.11■□□□□ 0.49
PCDH1-201ENST00000287008 TESMINQ9Y4I5 508 aa18.11■□□□□ 0.49
PCDH1-201ENST00000287008 PGLSO95336 258 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 SERPINA1P01009 418 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 CYP11A1P05108 521 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 AHCYP23526 432 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 RPS21P63220 83 aaKnown RBP18.1■□□□□ 0.49
PCDH1-201ENST00000287008 DCAF12L1Q5VU92 463 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 GALNT7Q86SF2 657 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 GIPC3Q8TF64 312 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 SNX33Q8WV41 574 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 DDX1Q92499 740 aaKnown RBP18.1■□□□□ 0.49
PCDH1-201ENST00000287008 GPR22Q99680 433 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 PLGRKTQ9HBL7 147 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 MAFFQ9ULX9 164 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 CYP8B1Q9UNU6 501 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 CXCR6O00574 342 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 LAMTOR5O43504 91 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 STC2O76061 302 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 AP2A2O94973 939 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 CTSAP10619 480 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 FITM2Q8N6M3 262 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 CLPTM1LQ96KA5 538 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 PEBP4Q96S96 227 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 SLC29A3Q9BZD2 475 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 NKX2-4Q9H2Z4 354 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 PHF11Q9UIL8 331 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 IRAK3Q9Y616 596 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 A0A1W2PP55 124 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 ALPPP05187 535 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 CA3P07451 260 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 STK19P49842 368 aaPredicted RBP18.1■□□□□ 0.49
PCDH1-201ENST00000287008 PUS10Q3MIT2 529 aaKnown RBP18.1■□□□□ 0.49
PCDH1-201ENST00000287008 RBM20Q5T481 1227 aaKnown RBP18.1■□□□□ 0.49
PCDH1-201ENST00000287008 SMYD5Q6GMV2 418 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.1■□□□□ 0.49
PCDH1-201ENST00000287008 OR4C6Q8NH72 309 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 KCNJ9Q92806 393 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 SHISA4Q96DD7 197 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 TRNT1Q96Q11 434 aaKnown RBP18.1■□□□□ 0.49
PCDH1-201ENST00000287008 ZDHHC18Q9NUE0 388 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 HAT1O14929 419 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 CCR10P46092 362 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 SGCBQ16585 318 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 ADGRG6Q86SQ4 1221 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 SCAMP4Q969E2 229 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 S100A14Q9HCY8 104 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 TMEM59LQ9UK28 342 aa18.1■□□□□ 0.49
PCDH1-201ENST00000287008 TSPAN6O43657 245 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 TSC22D2O75157 780 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 SRPRAP08240 638 aaKnown RBP18.09■□□□□ 0.49
PCDH1-201ENST00000287008 SLC26A3P40879 764 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 ELOCQ15369 112 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 TRIM74Q86UV6 250 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 PIM3Q86V86 326 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 FCRL4Q96PJ5 515 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 SERINC1Q9NRX5 453 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 CXorf49A8MYA2 514 aaPredicted RBP18.09■□□□□ 0.49
PCDH1-201ENST00000287008 PTGESO14684 152 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 BCKDKO14874 412 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 TCEA3O75764 348 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 AGR2O95994 175 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 THRBP10828 461 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 PIK3CBP42338 1070 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 SEPHS1P49903 392 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 RAB8AP61006 207 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 BTN3A2P78410 334 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 RUNX3Q13761 415 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 SLC29A4Q7RTT9 530 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 ZDHHC21Q8IVQ6 265 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 PLA2G15Q8NCC3 412 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 OR9A1PQ8NGU1 263 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 OR2M4Q96R27 311 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 KIFC1Q9BW19 673 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 MCCC2Q9HCC0 563 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 SPATA6Q9NWH7 488 aaPredicted RBP18.09■□□□□ 0.49
PCDH1-201ENST00000287008 TSC22D4Q9Y3Q8 395 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 COL2A1P02458 1487 aaPredicted RBP18.09■□□□□ 0.49
PCDH1-201ENST00000287008 BEST1O76090 585 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 CCNB2O95067 398 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 KLK1P06870 262 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 S100GP29377 79 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 MNDAP41218 407 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 DHCR24Q15392 516 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 ART5Q96L15 291 aa18.09■□□□□ 0.49
PCDH1-201ENST00000287008 SLC2A13Q96QE2 648 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms