RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 FAM26DQ5JW98 314 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 RTP2Q5QGT7 225 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 DOK6Q6PKX4 331 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 CADM3Q8N126 398 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 OR6K2Q8NGY2 324 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 UBTD2Q8WUN7 234 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 TRIB2Q92519 343 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 WBP2Q969T9 261 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 CEP295NLQ96MC4 621 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 ZNF300Q96RE9 604 aaPredicted RBP12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 BCL7BQ9BQE9 202 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 RETREG1Q9H6L5 497 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 LATS2Q9NRM7 1088 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 GIN1Q9NXP7 522 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 GPRC5BQ9NZH0 403 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 HCSTQ9UBK5 93 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 MAN2B2Q9Y2E5 1009 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 GMPPBQ9Y5P6 360 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 hCG_2039718K7EN88 272 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 WNT9AO14904 365 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 AQP9O43315 295 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 COCHO43405 550 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 FZD6O60353 706 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 STC2O76061 302 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 HOXB9P17482 250 aaPredicted RBP12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 JUNDP17535 347 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 TACR1P25103 407 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 MZF1P28698 734 aaPredicted RBP12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 SERPINB10P48595 397 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 TMED10P49755 219 aaKnown RBP12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 ABHD18Q0P651 414 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 OR2T5Q6IEZ7 315 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 CAPN13Q6MZZ7 669 aaPredicted RBP12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 RNF165Q6ZSG1 346 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 CHST9Q7L1S5 443 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 ZNF540Q8NDQ6 660 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 OR6Q1Q8NGQ2 317 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 OR2T29Q8NH02 315 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 DYNC2LI1Q8TCX1 351 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 MYO19Q96H55 970 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 GABARAPL1Q9H0R8 117 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 FBXO8Q9NRD0 319 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 SCN3BQ9NY72 215 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 PPT2Q9UMR5 302 aa12.91□□□□□ -0.34
SLC28A1-201ENST00000286749 ZBBXA8MT70 800 aa12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 CNOT3O75175 753 aaKnown RBP12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 STK16O75716 305 aa12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 CLDN9O95484 217 aa12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 EPHA2P29317 976 aa12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 TGFBR1P36897 503 aa12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 NEK2P51955 445 aa12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 CLDN8P56748 225 aa12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 FPGSQ05932 587 aa12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 NFATC2Q13469 925 aa12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 KEAP1Q14145 624 aa12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 MBTPS1Q14703 1052 aa12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 GPRC6AQ5T6X5 926 aa12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 SYT6Q5T7P8 510 aaPredicted RBP12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 RASAL3Q86YV0 1011 aa12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 SLC22A15Q8IZD6 547 aa12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 BTBD2Q9BX70 525 aa12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 TM6SF2Q9BZW4 377 aa12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 ABCG8Q9H221 673 aa12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 RMND5AQ9H871 391 aa12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 SAMD4AQ9UPU9 718 aaKnown RBP12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 ZNF106Q9H2Y7 1883 aaKnown RBP12.9□□□□□ -0.34
SLC28A1-201ENST00000286749 FAM20BO75063 409 aa12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 CCNDBP1O95273 360 aa12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 KRT6AP02538 564 aa12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 KRT6BP04259 564 aa12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 TGM1P22735 817 aa12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 KRT6CP48668 564 aa12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 MAPK11Q15759 364 aa12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 KDM4DQ6B0I6 523 aa12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 PRSS55Q6UWB4 352 aaPredicted RBP12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 LINC00299Q6ZSB3 139 aa12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 SNX20Q7Z614 316 aa12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 DNAJB8Q8NHS0 232 aa12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 SELENOMQ8WWX9 145 aa12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 RPL3LQ92901 407 aaKnown RBP12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 CDK5RAP1Q96SZ6 601 aaKnown RBP12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 HERC2P3Q9BVR0 1158 aa12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 SLC29A3Q9BZD2 475 aa12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 ASPSCR1Q9BZE9 553 aa12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 POLE4Q9NR33 117 aa12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 SACM1LQ9NTJ5 587 aa12.9□□□□□ -0.35
SLC28A1-201ENST00000286749 NT5C1B-RDH14C9J2C7 533 aa12.89□□□□□ -0.35
SLC28A1-201ENST00000286749 RGS10O43665 173 aa12.89□□□□□ -0.35
SLC28A1-201ENST00000286749 KDM1AO60341 852 aa12.89□□□□□ -0.35
SLC28A1-201ENST00000286749 EPORP19235 508 aa12.89□□□□□ -0.35
SLC28A1-201ENST00000286749 ITGALP20701 1170 aa12.89□□□□□ -0.35
SLC28A1-201ENST00000286749 ACRV1P26436 265 aa12.89□□□□□ -0.35
SLC28A1-201ENST00000286749 GATMP50440 423 aa12.89□□□□□ -0.35
SLC28A1-201ENST00000286749 ST13P50502 369 aaKnown RBP12.89□□□□□ -0.35
SLC28A1-201ENST00000286749 ARHGDIAP52565 204 aa12.89□□□□□ -0.35
SLC28A1-201ENST00000286749 HIST2H2ACQ16777 129 aaPredicted RBP12.89□□□□□ -0.35
SLC28A1-201ENST00000286749 INAVAQ3KP66 663 aa12.89□□□□□ -0.35
SLC28A1-201ENST00000286749 ARMC12Q5T9G4 340 aa12.89□□□□□ -0.35
SLC28A1-201ENST00000286749 DSG4Q86SJ6 1040 aa12.89□□□□□ -0.35
SLC28A1-201ENST00000286749 PAF1Q8N7H5 531 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms