RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SLIT3O75094 1523 aa16.12■□□□□ 0.17
SH3RF1-201ENST00000284637 ANXA8P13928 327 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 AP1S1P61966 158 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 ZNF181Q2M3W8 571 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 LSM14AQ8ND56 463 aaKnown RBP16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 GAL3ST1Q99999 423 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 PLD2O14939 933 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 MID1O15344 667 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 PRKACGP22612 351 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 ARFIP1P53367 373 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 NFKB2Q00653 900 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 DEFA5Q01523 94 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 ALG11Q2TAA5 492 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 AMIGO1Q86WK6 493 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 BEND7Q8N7W2 519 aaPredicted RBP16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 FBXL18Q96ME1 805 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 PCDHGB3Q9Y5G1 929 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 TBC1D3DA0A087WVF3 549 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 TBC1D3IA0A087WXS9 549 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 TBC1D3EA0A087X179 549 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 TBC1D3KA0A087X1G2 549 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 TBC1D3FA6NER0 549 aaPredicted RBP16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 TBC1D3LB9A6J9 549 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 H7C2Y5 167 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 TBC1D3HP0C7X1 549 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 NSG1P42857 185 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 DGKEP52429 567 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 PLA2G16P53816 162 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 TBC1D3GQ6DHY5 549 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 TBC1D3CQ6IPX1 549 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 SLC39A4Q6P5W5 647 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 RGL4Q8IZJ4 473 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 TBC1D3Q8IZP1 549 aaPredicted RBP16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 NTAN1Q96AB6 310 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 FBRSL1Q9HCM7 1045 aaKnown RBP16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 PAQR5Q9NXK6 330 aaPredicted RBP16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 CKLFQ9UBR5 152 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 AASSQ9UDR5 926 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 MRPS33Q9Y291 106 aaKnown RBP16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 CLIC1O00299 241 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 INMTO95050 263 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 DIRAS1O95057 198 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 PTX3P26022 381 aaPredicted RBP16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 CTNNB1P35222 781 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 CLK3P49761 638 aaKnown RBP16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 MEP1AQ16819 746 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 LGI4Q8N135 537 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 ITPAQ9BY32 194 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 ACTR3BQ9P1U1 418 aa16.11■□□□□ 0.17
SH3RF1-201ENST00000284637 C12orf71A8MTZ7 269 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 IRAK2O43187 625 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 KDM4BO94953 1096 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 CXCL14O95715 111 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 PRKCGP05129 697 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 PRKCHP24723 683 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 CSTF2P33240 577 aaKnown RBP eCLIP16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 SMCO1Q147U7 214 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 DCDC5Q6ZRR9 648 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 PHYKPLQ8IUZ5 450 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 PM20D2Q8IYS1 436 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 CDKN2AIPNLQ96HQ2 116 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 ZC3H10Q96K80 434 aaKnown RBP16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 SIGLEC10Q96LC7 697 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 OR14I1A6ND48 311 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 TEX28O15482 410 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 MTRF1O75570 445 aaKnown RBP16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 HEPACAMQ14CZ8 416 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 PTGES3Q15185 160 aaKnown RBP16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 TMEM220Q6QAJ8 160 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 HFE2Q6ZVN8 426 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 FIBCD1Q8N539 461 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 NRG4Q8WWG1 115 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 TBX5Q99593 518 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 MFSD1Q9H3U5 465 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 CPNE5Q9HCH3 593 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 NECTIN3Q9NQS3 549 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 ZNF282Q9UDV7 671 aaPredicted RBP16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 ERN1O75460 977 aaKnown RBP16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 ASGR1P07306 291 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 C8GP07360 202 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 DNAJA1P31689 397 aaKnown RBP16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 PLEKHG7Q6ZR37 379 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 CHST4Q8NCG5 386 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 OR10H5Q8NGA6 315 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 BIRC7Q96CA5 298 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 SHISA4Q96DD7 197 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 HAPLN3Q96S86 360 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 GPR22Q99680 433 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 SIRPGQ9P1W8 387 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 ZNF214Q9UL59 606 aaPredicted RBP16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 RIMKLBQ9ULI2 386 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 RPL36Q9Y3U8 105 aaKnown RBP16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 RBM7Q9Y580 266 aaKnown RBP16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 MRC1P22897 1456 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 LOC100130705A0A1B0GUX0 176 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 CDC7O00311 574 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 PPEF2O14830 753 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 VARSP26640 1264 aaKnown RBP16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 CSTF1Q05048 431 aaKnown RBP16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 NFATC3Q12968 1075 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms