RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 PNLIPRP1P54315 467 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 PPP1R3AQ16821 1122 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 KLHL35Q6PF15 583 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 RAB11FIP2Q7L804 512 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 ARHGAP22Q7Z5H3 698 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 TBC1D1Q86TI0 1168 aaPredicted RBP16.81■□□□□ 0.28
ATG3-201ENST00000283290 WDR36Q8NI36 951 aaKnown RBP16.81■□□□□ 0.28
ATG3-201ENST00000283290 MAGEC3Q8TD91 643 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 MCOLN3Q8TDD5 553 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 ZCCHC14Q8WYQ9 949 aaKnown RBP16.81■□□□□ 0.28
ATG3-201ENST00000283290 MED8Q96G25 268 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 ZDHHC12Q96GR4 267 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 PDLIM5Q96HC4 596 aaKnown RBP16.81■□□□□ 0.28
ATG3-201ENST00000283290 PRR11Q96HE9 360 aaPredicted RBP16.81■□□□□ 0.28
ATG3-201ENST00000283290 MIPEPQ99797 713 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 DPYSL5Q9BPU6 564 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 DERL2Q9GZP9 239 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 PCMTD2Q9NV79 361 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 ARL15Q9NXU5 204 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 PISDQ9UG56 409 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 TLK1Q9UKI8 766 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 ACOT9Q9Y305 439 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 HEATR5BQ9P2D3 2071 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 EFCAB7A8K855 629 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 RFPL1O75677 317 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 SNRPAP09012 282 aaKnown RBP16.81■□□□□ 0.28
ATG3-201ENST00000283290 MAPK10P53779 464 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 ANKS6Q68DC2 871 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 LRRC8EQ6NSJ5 796 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 SPESP1Q6UW49 350 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 TAOK1Q7L7X3 1001 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 MZB1Q8WU39 189 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 ESAMQ96AP7 390 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 CTRCQ99895 268 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 CCDC77Q9BR77 488 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 APMAPQ9HDC9 416 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 OR6C2Q9NZP2 312 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 PDP2Q9P2J9 529 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 EPHA6Q9UF33 1036 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 SH2B3Q9UQQ2 575 aa16.81■□□□□ 0.28
ATG3-201ENST00000283290 ACACAQ13085 2346 aa16.8■□□□□ 0.28
ATG3-201ENST00000283290 PLD2O14939 933 aa16.8■□□□□ 0.28
ATG3-201ENST00000283290 HCRTR1O43613 425 aa16.8■□□□□ 0.28
ATG3-201ENST00000283290 KRT37O76014 449 aa16.8■□□□□ 0.28
ATG3-201ENST00000283290 LTA4HP09960 611 aaKnown RBP16.8■□□□□ 0.28
ATG3-201ENST00000283290 MAGEA12P43365 314 aa16.8■□□□□ 0.28
ATG3-201ENST00000283290 SP140Q13342 867 aa16.8■□□□□ 0.28
ATG3-201ENST00000283290 ZIC1Q15915 447 aa16.8■□□□□ 0.28
ATG3-201ENST00000283290 CYP2A13Q16696 494 aa16.8■□□□□ 0.28
ATG3-201ENST00000283290 TAF1BQ53T94 588 aaPredicted RBP16.8■□□□□ 0.28
ATG3-201ENST00000283290 KIAA1614Q5VZ46 1190 aa16.8■□□□□ 0.28
ATG3-201ENST00000283290 FRA10AC1Q70Z53 315 aa16.8■□□□□ 0.28
ATG3-201ENST00000283290 FBXO39Q8N4B4 442 aa16.8■□□□□ 0.28
ATG3-201ENST00000283290 RAB33BQ9H082 229 aa16.8■□□□□ 0.28
ATG3-201ENST00000283290 SOHLH2Q9NX45 425 aa16.8■□□□□ 0.28
ATG3-201ENST00000283290 TAC3Q9UHF0 121 aa16.8■□□□□ 0.28
ATG3-201ENST00000283290 LNPEPQ9UIQ6 1025 aa16.8■□□□□ 0.28
ATG3-201ENST00000283290 USP24Q9UPU5 2620 aa16.8■□□□□ 0.28
ATG3-201ENST00000283290 A0A087X1B8 175 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 TLCD2A6NGC4 264 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 E7ENX8 843 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 PRICKLE3O43900 615 aaPredicted RBP16.79■□□□□ 0.28
ATG3-201ENST00000283290 HIST1H2AGP0C0S8 130 aaPredicted RBP16.79■□□□□ 0.28
ATG3-201ENST00000283290 EBLN1P0CF75 366 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 ERGP11308 486 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 FGF3P11487 239 aaPredicted RBP16.79■□□□□ 0.28
ATG3-201ENST00000283290 HIST1H2ADP20671 130 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 MAGP20916 626 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 GRIA3P42263 894 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 TBPL1P62380 186 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 TAP2Q03519 686 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 IFFO1Q0D2I5 559 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 EIF3IQ13347 325 aaKnown RBP16.79■□□□□ 0.28
ATG3-201ENST00000283290 NAE1Q13564 534 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 TRA2AQ13595 282 aaKnown RBP eCLIP16.79■□□□□ 0.282e-6■■■■□ 21.3
ATG3-201ENST00000283290 SF1Q15637 639 aaKnown RBP16.79■□□□□ 0.28
ATG3-201ENST00000283290 DEFB110Q30KQ9 67 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 AGTRAPQ6RW13 159 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 ISCA2Q86U28 154 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 LRRC56Q8IYG6 542 aaPredicted RBP16.79■□□□□ 0.28
ATG3-201ENST00000283290 MREGQ8N565 214 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 FBXO15Q8NCQ5 510 aaPredicted RBP16.79■□□□□ 0.28
ATG3-201ENST00000283290 HIST1H2AHQ96KK5 128 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 GPR78Q96P69 363 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 HIST1H2AJQ99878 128 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 EGFL8Q99944 293 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 H2AFJQ9BTM1 129 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 FAM60AQ9NP50 221 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 SPATA7Q9P0W8 599 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 DKK4Q9UBT3 224 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 PCDHGA8Q9Y5G5 932 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 MDC1Q14676 2089 aaKnown RBP16.79■□□□□ 0.28
ATG3-201ENST00000283290 ZFHX4Q86UP3 3567 aa16.79■□□□□ 0.28
ATG3-201ENST00000283290 TMEM8BA6NDV4 472 aa16.78■□□□□ 0.28
ATG3-201ENST00000283290 UBXN8O00124 270 aa16.78■□□□□ 0.28
ATG3-201ENST00000283290 TAF4O00268 1085 aa16.78■□□□□ 0.28
ATG3-201ENST00000283290 HGSO14964 777 aaPredicted RBP16.78■□□□□ 0.28
ATG3-201ENST00000283290 SLC16A5O15375 505 aa16.78■□□□□ 0.28
ATG3-201ENST00000283290 KDM1AO60341 852 aa16.78■□□□□ 0.28
ATG3-201ENST00000283290 TNFSF15O95150 251 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms