RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 SLC30A2Q9BRI3 323 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 TTPALQ9BTX7 342 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 NMUR2Q9GZQ4 415 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 UGT1A7Q9HAW7 530 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 UGT1A10Q9HAW8 530 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 UGT1A8Q9HAW9 530 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 TAS2R1Q9NYW7 299 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 CENPBD1B2RD01 187 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 MAP2K7O14733 419 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 AURKAO14965 403 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 PRKCHP24723 683 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 ZNF41P51814 821 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-201ENST00000282516 MRPS5P82675 430 aaKnown RBP8.56□□□□□ -1.04
NIPBL-201ENST00000282516 ANKRD46Q86W74 232 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 ZC3HC1Q86WB0 502 aaKnown RBP8.56□□□□□ -1.04
NIPBL-201ENST00000282516 ZCCHC10Q8TBK6 192 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 TNFRSF25Q93038 417 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 UBQLN2Q9UHD9 624 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 CD163L1Q9NR16 1453 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 FAM234BA2RU67 622 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 PLD2O14939 933 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 UGT2B4P06133 528 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 PRKCIP41743 596 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 OR5T2Q8NGG2 359 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 OR14K1Q8NGZ2 314 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 SMPDL3BQ92485 455 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 NPLQ9BXD5 320 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-201ENST00000282516 RNF38Q9H0F5 515 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 HIPK3Q9H422 1215 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-201ENST00000282516 TVP23BQ9NYZ1 205 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 RAI2Q9Y5P3 530 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 DUXAA6NLW8 204 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 CXCL11O14625 94 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 BLKP51451 505 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 KIAA1161Q6NSJ0 714 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 COQ8AQ8NI60 647 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 ELMO3Q96BJ8 720 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 LRRC46Q96FV0 321 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 FLRT1Q9NZU1 646 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 ERVK-18Q9QC07 812 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 CCDC88AQ3V6T2 1871 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 ZNF705EA8MWA4 302 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-201ENST00000282516 MAGEA11P43364 429 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 SMSP52788 366 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 ZNF366Q8N895 744 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 RBM15BQ8NDT2 890 aaKnown RBP8.56□□□□□ -1.04
NIPBL-201ENST00000282516 PRDM12Q9H4Q4 367 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 TAS2R3Q9NYW6 316 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 A0A1W2PQ45 241 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-201ENST00000282516 A0A1W2PQY0 241 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 OR6C70A6NIJ9 312 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 CD36P16671 472 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 AQP4P55087 323 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 MVKQ03426 396 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 KCTD19Q17RG1 926 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-201ENST00000282516 SLC25A52Q3SY17 297 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 ATAD3CQ5T2N8 411 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 KCTD9Q7L273 389 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 CMC1Q7Z7K0 106 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 KATNBL1Q9H079 304 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 CRTAC1Q9NQ79 661 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 HHLA1C9JL84 531 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 TLR4O00206 839 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 SCDO00767 359 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 RCBTB2O95199 551 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 ZNF35P13682 527 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 MAXP61244 160 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 MRPL41Q8IXM3 137 aaKnown RBP8.56□□□□□ -1.04
NIPBL-201ENST00000282516 GRHL3Q8TE85 626 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 NR4A3Q92570 626 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 OSTF1Q92882 214 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 GJD4Q96KN9 370 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-201ENST00000282516 SULT4A1Q9BR01 284 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 SSU72Q9NP77 194 aaKnown RBP8.56□□□□□ -1.04
NIPBL-201ENST00000282516 GNG8Q9UK08 70 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 KDM6BO15054 1643 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 FBP2O00757 339 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 RAD51DO75771 328 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 BNIP1Q12981 228 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 SCARB2Q14108 478 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 SLC1A5Q15758 541 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 PSRC1Q6PGN9 363 aaPredicted RBP8.55□□□□□ -1.04
NIPBL-201ENST00000282516 TRIM74Q86UV6 250 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 TRIM73Q86UV7 250 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 NXPE1Q8N323 547 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 RANBP3Q9H6Z4 567 aaPredicted RBP8.55□□□□□ -1.04
NIPBL-201ENST00000282516 IQSEC2Q5JU85 1478 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 SCAMP3O14828 347 aaKnown RBP8.55□□□□□ -1.04
NIPBL-201ENST00000282516 NTSR2O95665 410 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 ANXA8P13928 327 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 IFNGR1P15260 489 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 CLCN4P51793 760 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 EN1Q05925 392 aaPredicted RBP8.55□□□□□ -1.04
NIPBL-201ENST00000282516 EML3Q32P44 896 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 CRB2Q5IJ48 1285 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 LRIF1Q5T3J3 769 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 DCLRE1AQ6PJP8 1040 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 TRAPPC12Q8WVT3 735 aa8.55□□□□□ -1.04
NIPBL-201ENST00000282516 SLC25A36Q96CQ1 311 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms