RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 MCOLN3Q8TDD5 553 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 SELENOMQ8WWX9 145 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 NMD3Q96D46 503 aaKnown RBP7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 METTL2AQ96IZ6 378 aaKnown RBP7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 RDH12Q96NR8 316 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 FRG2BQ96QU4 278 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 CARS2Q9HA77 564 aaKnown RBP7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 PCDH12Q9NPG4 1184 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 SLC6A13Q9NSD5 602 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 ZNHIT2Q9UHR6 403 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 CD84Q9UIB8 345 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 INSL6Q9Y581 213 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 FADS2P1A8MWK0 482 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 H0Y858 1186 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 ZNF701M0R085 212 aaPredicted RBP7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 PRMT3O60678 531 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 LEFTY1O75610 366 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 ALPLP05186 524 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 CTSLP07711 333 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 RHOP08100 348 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 SRPRAP08240 638 aaKnown RBP7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 NELFEP18615 380 aaKnown RBP7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 POLR2EP19388 210 aaKnown RBP7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 MMP12P39900 470 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 GJA8P48165 433 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 ARSFP54793 590 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 CHRNB3Q05901 458 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 E2F2Q14209 437 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 ZNF805Q5CZA5 627 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 LDLRAP1Q5SW96 308 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 TTC33Q6PID6 262 aaPredicted RBP7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 TBPL2Q6SJ96 375 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 MICU2Q8IYU8 434 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 TRIML2Q8N7C3 387 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 KIAA1958Q8N8K9 716 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 CSGALNACT1Q8TDX6 532 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 GLMNQ92990 594 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 SCAMP4Q969E2 229 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 ITCHQ96J02 903 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 VPS50Q96JG6 964 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 THUMPD3Q9BV44 507 aaKnown RBP7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 LINC00597Q9H2U6 94 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 RMND5AQ9H871 391 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 DCAF13Q9NV06 445 aaKnown RBP7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 USE1Q9NZ43 259 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 DNAJB9Q9UBS3 223 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 IL36AQ9UHA7 158 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 PPT2Q9UMR5 302 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 PCDHB14Q9Y5E9 798 aa7.05□□□□□ -1.28
SPARCL1-201ENST00000282470 PABPN1LA6NDY0 278 aaKnown RBP7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 C16orf96A6NNT2 1141 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 TTC34A8MYJ7 566 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 CXCR6O00574 342 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 WNT9AO14904 365 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 RFPL2O75678 378 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 POU2F2P09086 479 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 HNRNPA1P09651 372 aaKnown RBP eCLIP7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 AMD1P17707 334 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 SOX11P35716 441 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 ETV3P41162 512 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 PRLHRP49683 370 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 CDK9P50750 372 aaKnown RBP7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 DAG1Q14118 895 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 CBX2Q14781 532 aaPredicted RBP7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 NKG7Q16617 165 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 DPY19L1Q2PZI1 675 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 ZNF658BQ4V348 819 aaPredicted RBP7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 ENPP6Q6UWR7 440 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 Q6ZVL8 140 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 ZNF786Q8N393 782 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 TMEM132CQ8N3T6 1108 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 FAM86B1Q8N7N1 296 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 PJA1Q8NG27 643 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 WDR20Q8TBZ3 569 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 MAGEE2Q8TD90 523 aaPredicted RBP7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 BTN2A2Q8WVV5 523 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 CYGBQ8WWM9 190 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 ELMO1Q92556 727 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 FIG4Q92562 907 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 TMBIM1Q969X1 311 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 MTFMTQ96DP5 389 aaKnown RBP7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 C11orf24Q96F05 449 aaPredicted RBP7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 REXO5Q96IC2 774 aaKnown RBP7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 FBXL20Q96IG2 436 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 BEGAINQ9BUH8 593 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 ADGRE2Q9UHX3 823 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 SLC22A14Q9Y267 594 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 INVSQ9Y283 1065 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 KIAA1549LQ6ZVL6 1849 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 CROCCQ5TZA2 2017 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 H3BSA7 217 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 PSMD11O00231 422 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 GSTA4O15217 222 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 SNAP29O95721 258 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 MT-ND1P03886 318 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 ASLP04424 464 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 HSD3B1P14060 373 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 TACR1P25103 407 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 HSD3B2P26439 372 aa7.04□□□□□ -1.28
SPARCL1-201ENST00000282470 SLC5A2P31639 672 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms