RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 OR2A14Q96R47 310 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 DDA1Q9BW61 102 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 CCDC177Q9NQR7 707 aaPredicted RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 FGF21Q9NSA1 209 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 INTS7Q9NVH2 962 aaKnown RBP6.31□□□□□ -1.4
CD44-204ENST00000279452 ARL15Q9NXU5 204 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 PDP2Q9P2J9 529 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 CTNNAL1Q9UBT7 734 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 TAC3Q9UHF0 121 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 PCDHGA7Q9Y5G6 932 aa6.31□□□□□ -1.4
CD44-204ENST00000279452 PTPRBP23467 1997 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 TEX51A0A1B0GUA7 166 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 NCF1BA6NI72 391 aaPredicted RBP6.3□□□□□ -1.4
CD44-204ENST00000279452 SRRM3A6NNA2 597 aaPredicted RBP6.3□□□□□ -1.4
CD44-204ENST00000279452 NCF1CA8MVU1 366 aaPredicted RBP6.3□□□□□ -1.4
CD44-204ENST00000279452 MYO1CO00159 1063 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 CDC7O00311 574 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 SLC16A5O15375 505 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 NVLO15381 856 aaKnown RBP6.3□□□□□ -1.4
CD44-204ENST00000279452 RAD1O60671 282 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 SCRG1O75711 98 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 STK17BO94768 372 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 CCNDBP1O95273 360 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 S100BP04271 92 aaPredicted RBP6.3□□□□□ -1.4
CD44-204ENST00000279452 FAM153BP0C7A2 387 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 CCDC166P0CW27 439 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 LIPCP11150 499 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 NCF1P14598 390 aaPredicted RBP6.3□□□□□ -1.4
CD44-204ENST00000279452 CD82P27701 267 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 ITPKBP27987 946 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 HSD17B2P37059 387 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 EIF2S3P41091 472 aaKnown RBP6.3□□□□□ -1.4
CD44-204ENST00000279452 MSH2P43246 934 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 RAB10P61026 200 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 TBPL1P62380 186 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 TUBB4BP68371 445 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 TIAL1Q01085 375 aaKnown RBP eCLIP6.3□□□□□ -1.4
CD44-204ENST00000279452 CSHL1Q14406 222 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 IL11RAQ14626 422 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 TGIF1Q15583 401 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 TSNQ15631 228 aaKnown RBP6.3□□□□□ -1.4
CD44-204ENST00000279452 PHKG1Q16816 387 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 SLC5A12Q1EHB4 618 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 FAM153CQ494X1 144 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 MANEAQ5SRI9 462 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 PRAMEF13Q5VWM6 474 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 IGF2-ASQ6U949 168 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 CDHR3Q6ZTQ4 885 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 CMC1Q7Z7K0 106 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 VASH2Q86V25 355 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 SPACA3Q8IXA5 215 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 CACNA2D3Q8IZS8 1091 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 CARFQ8N187 725 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 D2HGDHQ8N465 521 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 BMPERQ8N8U9 685 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 GALNT6Q8NCL4 622 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 DENND1AQ8TEH3 1009 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 ZNF480Q8WV37 535 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 KIAA1143Q96AT1 154 aaPredicted RBP6.3□□□□□ -1.4
CD44-204ENST00000279452 TCTN2Q96GX1 697 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 CCDC138Q96M89 665 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 TSNARE1Q96NA8 513 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 PAFAH2Q99487 392 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 GPR22Q99680 433 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 ZPBPQ9BS86 351 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 PITPNM3Q9BZ71 974 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 ATG10Q9H0Y0 220 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 VPS11Q9H270 941 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 ACSS3Q9H6R3 686 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 PARVBQ9HBI1 364 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 POPDC3Q9HBV1 291 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 MRPS30Q9NP92 439 aaKnown RBP6.3□□□□□ -1.4
CD44-204ENST00000279452 FBXO8Q9NRD0 319 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 SIDT1Q9NXL6 827 aaKnown RBP6.3□□□□□ -1.4
CD44-204ENST00000279452 DKK4Q9UBT3 224 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 TLK1Q9UKI8 766 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 RNF112Q9ULX5 631 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 PDE10AQ9Y233 779 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 BTRCQ9Y297 605 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 PCDHGA3Q9Y5H0 932 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 LAMA1P25391 3075 aa6.3□□□□□ -1.4
CD44-204ENST00000279452 COL27A1Q8IZC6 1860 aaPredicted RBP6.3□□□□□ -1.4
CD44-204ENST00000279452 DCHS1Q96JQ0 3298 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 A0A0J9YVX5 310 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 SMIM23A6NLE4 172 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 SUPT3HB4E1H0 165 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 E7EQ34 232 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 GFYI3L273 518 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 TAF4O00268 1085 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 RIPK2O43353 540 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 CPNE3O75131 537 aaKnown RBP6.29□□□□□ -1.4
CD44-204ENST00000279452 SUPT3HO75486 399 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 OR2B3O76000 313 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 KRT38O76015 456 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 TIAF1O95411 115 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 TSPAN12O95859 305 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 NTRK1P04629 796 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 EIF2S1P05198 315 aaKnown RBP6.29□□□□□ -1.4
CD44-204ENST00000279452 ANXA5P08758 320 aa6.29□□□□□ -1.4
CD44-204ENST00000279452 ENO2P09104 434 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms