RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 NDUFV2P19404 249 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 IMPA1P29218 277 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 IGFALSP35858 605 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 EMX2Q04743 252 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 MAD2L1Q13257 205 aaPredicted RBP14.92□□□□□ -0.02
COPS3-201ENST00000268717 E2F2Q14209 437 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 PDCD4Q53EL6 469 aaKnown RBP14.92□□□□□ -0.02
COPS3-201ENST00000268717 COQ5Q5HYK3 327 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 C6orf136Q5SQH8 315 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 LIPJQ5W064 366 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 METRNLQ641Q3 311 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 TBC1D3GQ6DHY5 549 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 TBC1D3CQ6IPX1 549 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 CRTC3Q6UUV7 619 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 HACD2Q6Y1H2 254 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 SCUBE1Q8IWY4 988 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 TBC1D3Q8IZP1 549 aaPredicted RBP14.92□□□□□ -0.02
COPS3-201ENST00000268717 SNX31Q8N9S9 440 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 OR2T34Q8NGX1 318 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 OR2T11Q8NH01 316 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 SCARF2Q96GP6 870 aaPredicted RBP14.92□□□□□ -0.02
COPS3-201ENST00000268717 PKP4Q99569 1192 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 SGK2Q9HBY8 427 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 ASIC5Q9NY37 505 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 ZIM2Q9NZV7 527 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 FAM8A1Q9UBU6 413 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 SNX6Q9UNH7 406 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 RNF11Q9Y3C5 154 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 CCL27Q9Y4X3 112 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 GPR45Q9Y5Y3 372 aa14.92□□□□□ -0.02
COPS3-201ENST00000268717 PLXND1Q9Y4D7 1925 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 KCNE1BA0A087WTH5 132 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 MANBAO00462 879 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 LSM1O15116 133 aaKnown RBP14.91□□□□□ -0.02
COPS3-201ENST00000268717 ATP6V1G2O95670 118 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 IGLV3-19P01714 112 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 BDKRB1P46663 353 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 HTR6P50406 440 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 KIAA1024LP59773 190 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 SLC25A3Q00325 362 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 SIM2Q14190 667 aaPredicted RBP14.91□□□□□ -0.02
COPS3-201ENST00000268717 NFE2L1Q14494 772 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 ABRAXAS2Q15018 415 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 KIF19Q2TAC6 998 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 AGKQ53H12 422 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 PGM2L1Q6PCE3 622 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 DOK6Q6PKX4 331 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 PRR23BQ6ZRT6 265 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 NET1Q7Z628 596 aaPredicted RBP14.91□□□□□ -0.02
COPS3-201ENST00000268717 THOC6Q86W42 341 aaKnown RBP14.91□□□□□ -0.02
COPS3-201ENST00000268717 GALNT13Q8IUC8 556 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 ULK2Q8IYT8 1036 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 PGAM4Q8N0Y7 254 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 DCBLD1Q8N8Z6 715 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 OR9A1PQ8NGU1 263 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 CFAP61Q8NHU2 1237 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 GAB3Q8WWW8 586 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 MRPL1Q9BYD6 325 aaKnown RBP14.91□□□□□ -0.02
COPS3-201ENST00000268717 ZDHHC5Q9C0B5 715 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 POLMQ9NP87 494 aaPredicted RBP14.91□□□□□ -0.02
COPS3-201ENST00000268717 SLC22A14Q9Y267 594 aa14.91□□□□□ -0.02
COPS3-201ENST00000268717 A0A088AWK7 358 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 TCRBV21S2A2A0A5A6 115 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 DYTNA2CJ06 578 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 LRRC72A6NJI9 287 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 CACNB4O00305 520 aaPredicted RBP14.9□□□□□ -0.02
COPS3-201ENST00000268717 PEX11AO75192 247 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 SLC16A8O95907 504 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 JUPP14923 745 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 PRPH2P23942 346 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 HSD17B2P37059 387 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 CASP2P42575 452 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 NUDT2P50583 147 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 PNLIPRP1P54315 467 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 NUMA1Q14980 2115 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 TRMT5Q32P41 509 aaKnown RBP14.9□□□□□ -0.02
COPS3-201ENST00000268717 TCHHL1Q5QJ38 904 aaPredicted RBP14.9□□□□□ -0.02
COPS3-201ENST00000268717 C10orf62Q5T681 223 aaPredicted RBP14.9□□□□□ -0.02
COPS3-201ENST00000268717 ANO7Q6IWH7 933 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 FAM83HQ6ZRV2 1179 aaPredicted RBP14.9□□□□□ -0.02
COPS3-201ENST00000268717 GK5Q6ZS86 529 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 DCUN1D3Q8IWE4 304 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 SFRP1Q8N474 314 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 RCN3Q96D15 328 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 THTPAQ9BU02 230 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 APOOQ9BUR5 198 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 ZMYND15Q9H091 742 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 BTBD1Q9H0C5 482 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 USP36Q9P275 1121 aaKnown RBP14.9□□□□□ -0.02
COPS3-201ENST00000268717 KLQ9UEF7 1012 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 RAB23Q9ULC3 237 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 OR1A2Q9Y585 309 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 PCYT1BQ9Y5K3 369 aaPredicted RBP14.9□□□□□ -0.02
COPS3-201ENST00000268717 THADAQ6YHU6 1953 aa14.9□□□□□ -0.02
COPS3-201ENST00000268717 PRR19A6NJB7 356 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 TOR1BO14657 336 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 CIB2O75838 187 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 ACPPP15309 386 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 GABRG2P18507 467 aa14.89□□□□□ -0.03
COPS3-201ENST00000268717 KELP23276 732 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms