RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 PRKCZQ05513 592 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 POM121L1PQ3SYA9 428 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 NCCRP1Q6ZVX7 275 aaPredicted RBP16.38■□□□□ 0.21
SQLE-201ENST00000265896 SLC24A5Q71RS6 500 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 ADHFE1Q8IWW8 467 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 TSPEARQ8WU66 669 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 MUL1Q969V5 352 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 FUBP3Q96I24 572 aaKnown RBP eCLIP16.38■□□□□ 0.212e-8■■■□□ 17.7
SQLE-201ENST00000265896 PPP3R2Q96LZ3 170 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 C6orf62Q9GZU0 229 aaPredicted RBP16.38■□□□□ 0.21
SQLE-201ENST00000265896 MUC13Q9H3R2 512 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 DCAF13Q9NV06 445 aaKnown RBP16.38■□□□□ 0.21
SQLE-201ENST00000265896 TBCCD1Q9NVR7 557 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 KIF17Q9P2E2 1029 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 CASP8AP2Q9UKL3 1982 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 RFXANKO14593 260 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 DNTTP04053 509 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 C7P10643 843 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 EPB42P16452 691 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 CSKP41240 450 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 GBX1Q14549 363 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 RUNDC3AQ59EK9 446 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 RBM48Q5RL73 367 aaKnown RBP16.38■□□□□ 0.21
SQLE-201ENST00000265896 CACTIN-AS1Q8N1I8 211 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 GOLM1Q8NBJ4 401 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 AUTS2Q8WXX7 1259 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 ABHD8Q96I13 439 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 KCNC2Q96PR1 638 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 P2RY12Q9H244 342 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 RRAGCQ9HB90 399 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 ZFYVE1Q9HBF4 777 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 INTS6Q9UL03 887 aaKnown RBP16.38■□□□□ 0.21
SQLE-201ENST00000265896 PCDHGA10Q9Y5H3 936 aa16.38■□□□□ 0.21
SQLE-201ENST00000265896 TET1Q8NFU7 2136 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 ACPPP15309 386 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 CDH4P55283 916 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 RPS14P62263 151 aaKnown RBP16.37■□□□□ 0.21
SQLE-201ENST00000265896 EPS8Q12929 822 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 PRSS36Q5K4E3 855 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 ZNF691Q5VV52 312 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 SLC22A16Q86VW1 577 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 VRK3Q8IV63 474 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 UROC1Q96N76 676 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 CD244Q9BZW8 370 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 ELOVL6Q9H5J4 265 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 C1orf109Q9NX04 203 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 TAS2R16Q9NYV7 291 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 SLC22A14Q9Y267 594 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 SAMHD1Q9Y3Z3 626 aaKnown RBP16.37■□□□□ 0.21
SQLE-201ENST00000265896 ARNTLO00327 626 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 PFDN6O15212 129 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 HSMCR30P0CW71 290 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 DBTP11182 482 aaKnown RBP16.37■□□□□ 0.21
SQLE-201ENST00000265896 GTF2E2P29084 291 aaKnown RBP16.37■□□□□ 0.21
SQLE-201ENST00000265896 CA8P35219 290 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 COLEC12Q5KU26 742 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 ZSWIM9Q86XI8 627 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 OR8J3Q8NGG0 315 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 TUBA1CQ9BQE3 449 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 C1QTNF3Q9BXJ4 246 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 TMEM121BQ9BXQ6 578 aaPredicted RBP16.37■□□□□ 0.21
SQLE-201ENST00000265896 TMEM9Q9P0T7 183 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 GNPTGQ9UJJ9 305 aa16.37■□□□□ 0.21
SQLE-201ENST00000265896 SCN4AP35499 1836 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 LINC00854A0A1B0GVQ3 168 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 GAPDHSO14556 408 aaPredicted RBP16.36■□□□□ 0.21
SQLE-201ENST00000265896 JRKO75564 520 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 PGLSO95336 258 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 MSH3P20585 1137 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 OR1E2P47887 323 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 RPIAP49247 311 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 STK19P49842 368 aaPredicted RBP16.36■□□□□ 0.21
SQLE-201ENST00000265896 CRISP3P54108 245 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 CREMQ03060 361 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 CACNG1Q06432 222 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 GRIK2Q13002 908 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 CPZQ66K79 652 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 FUT10Q6P4F1 479 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 C17orf99Q6UX52 265 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 PYURFQ96I23 114 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 PANX1Q96RD7 426 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 GORASP2Q9H8Y8 452 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 GPN2Q9H9Y4 310 aaPredicted RBP16.36■□□□□ 0.21
SQLE-201ENST00000265896 SERHLQ9NQF3 203 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 OLA1Q9NTK5 396 aaKnown RBP16.36■□□□□ 0.21
SQLE-201ENST00000265896 FNIP2Q9P278 1114 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 A6NL46 340 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 TBX1O43435 398 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 UGT2B11O75310 529 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 WDR47O94967 919 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 ALDH2P05091 517 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 CYBAP13498 195 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 PRKAR2AP13861 404 aaKnown RBP16.36■□□□□ 0.21
SQLE-201ENST00000265896 ZNF7P17097 686 aaPredicted RBP16.36■□□□□ 0.21
SQLE-201ENST00000265896 BPIP17213 487 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 HNF1BP35680 557 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 GSTM4Q03013 218 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 NFATC2Q13469 925 aa16.36■□□□□ 0.21
SQLE-201ENST00000265896 PCBP2Q15366 365 aaKnown RBP eCLIP16.36■□□□□ 0.21
SQLE-201ENST00000265896 SERPINA13PQ6UXR4 307 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms