RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 C1QTNF3Q9BXJ4 246 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 SMG9Q9H0W8 520 aaKnown RBP8.9□□□□□ -0.98
MSH4-201ENST00000263187 KIF17Q9P2E2 1029 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 LHX3Q9UBR4 397 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 CASP8AP2Q9UKL3 1982 aa8.9□□□□□ -0.98
MSH4-201ENST00000263187 ILVBLA1L0T0 632 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 KRBA1A5PL33 1030 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 ARNTLO00327 626 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 GAPDHSO14556 408 aaPredicted RBP8.9□□□□□ -0.99
MSH4-201ENST00000263187 WDR47O94967 919 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 MT-ND2P03891 347 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 OPN1SWP03999 348 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 IMPDH2P12268 514 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 MSH3P20585 1137 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 HPCAL1P37235 193 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 DAPP51397 102 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 NUDT6P53370 316 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 ACLYP53396 1101 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 RPS14P62263 151 aaKnown RBP8.9□□□□□ -0.99
MSH4-201ENST00000263187 CTF1Q16619 201 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 TRIM71Q2Q1W2 868 aaKnown RBP8.9□□□□□ -0.99
MSH4-201ENST00000263187 RUNDC3AQ59EK9 446 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 GPR153Q6NV75 609 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 PAGE2Q7Z2X7 111 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 LSRQ86X29 649 aaPredicted RBP8.9□□□□□ -0.99
MSH4-201ENST00000263187 HS6ST3Q8IZP7 471 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 ZBTB8BQ8NAP8 495 aaPredicted RBP8.9□□□□□ -0.99
MSH4-201ENST00000263187 OR8J3Q8NGG0 315 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 PSMA8Q8TAA3 256 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 HTRA1Q92743 480 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 HDAC2Q92769 488 aaKnown RBP8.9□□□□□ -0.99
MSH4-201ENST00000263187 FATE1Q969F0 183 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 ASIC4Q96FT7 647 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 SCLYQ96I15 445 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 TTPALQ9BTX7 342 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 DCAF13Q9NV06 445 aaKnown RBP8.9□□□□□ -0.99
MSH4-201ENST00000263187 C1orf109Q9NX04 203 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 IL37Q9NZH6 218 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 C3orf18Q9UK00 162 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 ERGIC3Q9Y282 383 aa8.9□□□□□ -0.99
MSH4-201ENST00000263187 VWA8A3KMH1 1905 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 ANKRD36A6QL64 1941 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 GLYATL1P3A0A0U1RQE8 302 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 ZNF99A8MXY4 864 aaPredicted RBP8.89□□□□□ -0.99
MSH4-201ENST00000263187 C7P10643 843 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 HMGCLP35914 325 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 CTSOP43234 321 aaPredicted RBP8.89□□□□□ -0.99
MSH4-201ENST00000263187 MASP1P48740 699 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 VLDLRP98155 873 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 MVKQ03426 396 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 SLC13A2Q13183 592 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 COL9A2Q14055 689 aaPredicted RBP8.89□□□□□ -0.99
MSH4-201ENST00000263187 INAQ16352 499 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 RBM48Q5RL73 367 aaKnown RBP8.89□□□□□ -0.99
MSH4-201ENST00000263187 SERPINA13PQ6UXR4 307 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 GPR26Q8NDV2 337 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 GPR156Q8NFN8 814 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 FAR1Q8WVX9 515 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 HPS1Q92902 700 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 PANX1Q96RD7 426 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 RNF167Q9H6Y7 350 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 ERVK-11Q9UQG0 969 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 TRIM17Q9Y577 477 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 GMPPBQ9Y5P6 360 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 TRIM43BA6NCK2 446 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 OR6C75A6NL08 312 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 SYN3O14994 580 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 FAM20BO75063 409 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 SULT1C4O75897 302 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 POU2F1P14859 743 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 ITGALP20701 1170 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 DGKAP23743 735 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 CLK3P49761 638 aaKnown RBP8.89□□□□□ -0.99
MSH4-201ENST00000263187 GRSF1Q12849 480 aaKnown RBP eCLIP8.89□□□□□ -0.99
MSH4-201ENST00000263187 TCTN1Q2MV58 587 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 SPOUT1Q5T280 376 aaKnown RBP8.89□□□□□ -0.99
MSH4-201ENST00000263187 ALG1LQ6GMV1 187 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 DEFB128Q7Z7B8 93 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 PYURFQ96I23 114 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 KCNC2Q96PR1 638 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 ROGDIQ9GZN7 287 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 GORASP2Q9H8Y8 452 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 ABCB10Q9NRK6 738 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 TRPM5Q9NZQ8 1165 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 GNPTGQ9UJJ9 305 aa8.89□□□□□ -0.99
MSH4-201ENST00000263187 SAMHD1Q9Y3Z3 626 aaKnown RBP8.89□□□□□ -0.99
MSH4-201ENST00000263187 A0A096LPI6 279 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 NPIPB15A6NHN6 443 aaPredicted RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 CLDN9O95484 217 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 EOMESO95936 686 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 IL6P05231 212 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 GALTP07902 379 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 PORP16435 677 aaPredicted RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 ENGP17813 658 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 C21orf33P30042 268 aaPredicted RBP8.88□□□□□ -0.99
MSH4-201ENST00000263187 CD97P48960 835 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 CLCN4P51793 760 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 BCL2L1Q07817 233 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 PTCHD3Q3KNS1 767 aa8.88□□□□□ -0.99
MSH4-201ENST00000263187 USP39Q53GS9 565 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms