RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 GGT5P36269 586 aa23.58■■□□□ 1.37
SCN1B-201ENST00000262631 SLC6A12P48065 614 aa23.58■■□□□ 1.37
SCN1B-201ENST00000262631 TBPL1P62380 186 aa23.58■■□□□ 1.37
SCN1B-201ENST00000262631 DAB2P98082 770 aa23.58■■□□□ 1.37
SCN1B-201ENST00000262631 TSTA3Q13630 321 aaPredicted RBP23.58■■□□□ 1.37
SCN1B-201ENST00000262631 NR1D2Q14995 579 aa23.58■■□□□ 1.37
SCN1B-201ENST00000262631 RPS27LQ71UM5 84 aaKnown RBP23.58■■□□□ 1.37
SCN1B-201ENST00000262631 OR56A3Q8NH54 315 aa23.58■■□□□ 1.37
SCN1B-201ENST00000262631 OR10G6Q8NH81 332 aa23.58■■□□□ 1.37
SCN1B-201ENST00000262631 HMGCLL1Q8TB92 370 aa23.58■■□□□ 1.37
SCN1B-201ENST00000262631 BAHD1Q8TBE0 780 aaPredicted RBP23.58■■□□□ 1.37
SCN1B-201ENST00000262631 RAB11FIP5Q9BXF6 653 aa23.58■■□□□ 1.37
SCN1B-201ENST00000262631 ABCF3Q9NUQ8 709 aa23.58■■□□□ 1.37
SCN1B-201ENST00000262631 INTS7Q9NVH2 962 aaKnown RBP23.58■■□□□ 1.37
SCN1B-201ENST00000262631 MID2Q9UJV3 735 aa23.58■■□□□ 1.37
SCN1B-201ENST00000262631 GVINP1Q7Z2Y8 2422 aa23.58■■□□□ 1.37
SCN1B-201ENST00000262631 B4GAT1O43505 415 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 KDM1AO60341 852 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 GFRA3O60609 400 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 LDOC1O95751 146 aaPredicted RBP23.57■■□□□ 1.36
SCN1B-201ENST00000262631 EEF1DP29692 281 aaKnown RBP23.57■■□□□ 1.36
SCN1B-201ENST00000262631 HSD17B2P37059 387 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 HHATQ5VTY9 493 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 NKAIN2Q5VXU1 208 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 EFL1Q7Z2Z2 1120 aaKnown RBP23.57■■□□□ 1.36
SCN1B-201ENST00000262631 TCAIMQ8N3R3 496 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 RAB42Q8N4Z0 105 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 UBTD2Q8WUN7 234 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 CD244Q9BZW8 370 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 TWSG1Q9GZX9 223 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 FAM53CQ9NYF3 392 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 KCNK4Q9NYG8 393 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 FTSJ1Q9UET6 329 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 STX16-NPEPL1H3BU86 382 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 STX16O14662 325 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 CHRM5P08912 532 aaPredicted RBP23.57■■□□□ 1.36
SCN1B-201ENST00000262631 POLR2CP19387 275 aaPredicted RBP23.57■■□□□ 1.36
SCN1B-201ENST00000262631 PSMB5P28074 263 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 OAS2P29728 719 aaKnown RBP23.57■■□□□ 1.36
SCN1B-201ENST00000262631 GPR3P46089 330 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 SLC22A9Q8IVM8 553 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 KIAA2013Q8IYS2 634 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 OR6C4Q8NGE1 309 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 IFI44Q8TCB0 444 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 OR4K3Q96R72 315 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 SGPP1Q9BX95 441 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 CNOT10Q9H9A5 744 aaKnown RBP23.57■■□□□ 1.36
SCN1B-201ENST00000262631 TMCO1Q9UM00 188 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 SLC22A14Q9Y267 594 aa23.57■■□□□ 1.36
SCN1B-201ENST00000262631 IGHV1OR21-1A0A087WYE8 117 aa23.56■■□□□ 1.36
SCN1B-201ENST00000262631 STK16O75716 305 aa23.56■■□□□ 1.36
SCN1B-201ENST00000262631 CKMT2P17540 419 aa23.56■■□□□ 1.36
SCN1B-201ENST00000262631 PPP1CAP62136 330 aa23.56■■□□□ 1.36
SCN1B-201ENST00000262631 HERVK_113P63132 956 aa23.56■■□□□ 1.36
SCN1B-201ENST00000262631 YBX1P67809 324 aaKnown RBP23.56■■□□□ 1.36
SCN1B-201ENST00000262631 PCBP2Q15366 365 aaKnown RBP eCLIP23.56■■□□□ 1.36
SCN1B-201ENST00000262631 LIPMQ5VYY2 423 aa23.56■■□□□ 1.36
SCN1B-201ENST00000262631 SPRED1Q7Z699 444 aa23.56■■□□□ 1.36
SCN1B-201ENST00000262631 SMPDL3AQ92484 453 aa23.56■■□□□ 1.36
SCN1B-201ENST00000262631 NAT6Q93015 286 aa23.56■■□□□ 1.36
SCN1B-201ENST00000262631 CCDC126Q96EE4 140 aa23.56■■□□□ 1.36
SCN1B-201ENST00000262631 NSUN5Q96P11 429 aaKnown RBP23.56■■□□□ 1.36
SCN1B-201ENST00000262631 ACAT2Q9BWD1 397 aa23.56■■□□□ 1.36
SCN1B-201ENST00000262631 ERVK-6Q9BXR3 956 aa23.56■■□□□ 1.36
SCN1B-201ENST00000262631 PITPNM3Q9BZ71 974 aa23.56■■□□□ 1.36
SCN1B-201ENST00000262631 CCDC177Q9NQR7 707 aaPredicted RBP23.56■■□□□ 1.36
SCN1B-201ENST00000262631 HRASLS2Q9NWW9 162 aa23.56■■□□□ 1.36
SCN1B-201ENST00000262631 FAM221BA6H8Z2 402 aa23.55■■□□□ 1.36
SCN1B-201ENST00000262631 PRICKLE3O43900 615 aaPredicted RBP23.55■■□□□ 1.36
SCN1B-201ENST00000262631 CCNT2O60583 730 aaKnown RBP23.55■■□□□ 1.36
SCN1B-201ENST00000262631 WDR47O94967 919 aa23.55■■□□□ 1.36
SCN1B-201ENST00000262631 PROS1P07225 676 aa23.55■■□□□ 1.36
SCN1B-201ENST00000262631 PNLIPP16233 465 aa23.55■■□□□ 1.36
SCN1B-201ENST00000262631 EPHA4P54764 986 aa23.55■■□□□ 1.36
SCN1B-201ENST00000262631 NAGLUP54802 743 aa23.55■■□□□ 1.36
SCN1B-201ENST00000262631 ZNF678Q5SXM1 525 aa23.55■■□□□ 1.36
SCN1B-201ENST00000262631 CES4AQ5XG92 561 aa23.55■■□□□ 1.36
SCN1B-201ENST00000262631 ZCCHC23Q6ZST2 131 aa23.55■■□□□ 1.36
SCN1B-201ENST00000262631 PIP4P1Q86T03 277 aa23.55■■□□□ 1.36
SCN1B-201ENST00000262631 NUDCD3Q8IVD9 361 aa23.55■■□□□ 1.36
SCN1B-201ENST00000262631 CCDC3Q9BQI4 270 aa23.55■■□□□ 1.36
SCN1B-201ENST00000262631 COL5A1P20908 1838 aaPredicted RBP23.55■■□□□ 1.36
SCN1B-201ENST00000262631 OR5K3A6NET4 321 aa23.54■■□□□ 1.36
SCN1B-201ENST00000262631 ZNF839A8K0R7 811 aa23.54■■□□□ 1.36
SCN1B-201ENST00000262631 E2F3O00716 465 aa23.54■■□□□ 1.36
SCN1B-201ENST00000262631 BIRC5O15392 142 aa23.54■■□□□ 1.36
SCN1B-201ENST00000262631 RPS17P08708 135 aaKnown RBP23.54■■□□□ 1.36
SCN1B-201ENST00000262631 FGF3P11487 239 aaPredicted RBP23.54■■□□□ 1.36
SCN1B-201ENST00000262631 AMD1P17707 334 aa23.54■■□□□ 1.36
SCN1B-201ENST00000262631 IMPDH1P20839 514 aa23.54■■□□□ 1.36
SCN1B-201ENST00000262631 CAPZBP47756 277 aa23.54■■□□□ 1.36
SCN1B-201ENST00000262631 DUSP3P51452 185 aaPredicted RBP23.54■■□□□ 1.36
SCN1B-201ENST00000262631 DNAJB13P59910 316 aa23.54■■□□□ 1.36
SCN1B-201ENST00000262631 AMZ1Q400G9 498 aa23.54■■□□□ 1.36
SCN1B-201ENST00000262631 UNC50Q53HI1 259 aa23.54■■□□□ 1.36
SCN1B-201ENST00000262631 THOC6Q86W42 341 aaKnown RBP23.54■■□□□ 1.36
SCN1B-201ENST00000262631 FAM20CQ8IXL6 584 aa23.54■■□□□ 1.36
SCN1B-201ENST00000262631 KLHDC8AQ8IYD2 350 aa23.54■■□□□ 1.36
SCN1B-201ENST00000262631 FLVCR1-AS1Q8TAF5 88 aa23.54■■□□□ 1.36
SCN1B-201ENST00000262631 L3HYPDHQ96EM0 354 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms