RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 MOSPD1Q9UJG1 213 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 MID2Q9UJV3 735 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 VPS9D1Q9Y2B5 631 aa12.96□□□□□ -0.33
SGCA-201ENST00000262018 A0A0U1RQS6 177 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 C1orf232A0A0U1RR37 186 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 NPIPB15A6NHN6 443 aaPredicted RBP12.96□□□□□ -0.34
SGCA-201ENST00000262018 PFDN6O15212 129 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 STK17BO94768 372 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 KLHL2O95198 593 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 CLDN7O95471 211 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 FURINP09958 794 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 ELFN1P0C7U0 828 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 PRSS56P0CW18 603 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 PRF1P14222 555 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 FDXRP22570 491 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 F8A1P23610 371 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 VIPR1P32241 457 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 TTPAP49638 278 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 CACNG1Q06432 222 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 RALGDSQ12967 914 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 ZNF460Q14592 562 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 INPP5JQ15735 1006 aaPredicted RBP12.96□□□□□ -0.34
SGCA-201ENST00000262018 CHI3L2Q15782 390 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 AARS2Q5JTZ9 985 aaKnown RBP12.96□□□□□ -0.34
SGCA-201ENST00000262018 RNF187Q5TA31 235 aaPredicted RBP12.96□□□□□ -0.34
SGCA-201ENST00000262018 ZNF549Q6P9A3 640 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 C6orf89Q6UWU4 347 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 OTOAQ7RTW8 1153 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 SLC34A3Q8N130 599 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 BMPERQ8N8U9 685 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 OR56A4Q8NGH8 313 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 RDH11Q8TC12 318 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 KCTD4Q8WVF5 259 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 LPGAT1Q92604 370 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 MARVELD3Q96A59 401 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 GPR78Q96P69 363 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 AARSD1Q9BTE6 412 aaKnown RBP12.96□□□□□ -0.34
SGCA-201ENST00000262018 TSSK1BQ9BXA7 367 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 SLC29A3Q9BZD2 475 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 TRIT1Q9H3H1 467 aaKnown RBP12.96□□□□□ -0.34
SGCA-201ENST00000262018 POPDC3Q9HBV1 291 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 SPATS2LQ9NUQ6 558 aaKnown RBP12.96□□□□□ -0.34
SGCA-201ENST00000262018 MAP10Q9P2G4 905 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 RUVBL2Q9Y230 463 aaKnown RBP12.96□□□□□ -0.34
SGCA-201ENST00000262018 CRYL1Q9Y2S2 319 aa12.96□□□□□ -0.34
SGCA-201ENST00000262018 OAS3Q9Y6K5 1087 aaKnown RBP12.96□□□□□ -0.34
SGCA-201ENST00000262018 TMEM202A6NGA9 273 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 SNNO75324 88 aaPredicted RBP12.95□□□□□ -0.34
SGCA-201ENST00000262018 NDUFS3O75489 264 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 CPA3P15088 417 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 ZNF30P17039 623 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 CSF2RBP32927 897 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 SLC26A3P40879 764 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 STAT5AP42229 794 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 PPM1FP49593 454 aaPredicted RBP12.95□□□□□ -0.34
SGCA-201ENST00000262018 LIG3P49916 1009 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 CDKN1CP49918 316 aaPredicted RBP12.95□□□□□ -0.34
SGCA-201ENST00000262018 KPNA2P52292 529 aaKnown RBP12.95□□□□□ -0.34
SGCA-201ENST00000262018 PGGT1BP53609 377 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 CDKN2DP55273 166 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 TIAL1Q01085 375 aaKnown RBP eCLIP12.95□□□□□ -0.34
SGCA-201ENST00000262018 DLG1Q12959 904 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 NR1D2Q14995 579 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 PRR30Q53SZ7 412 aaPredicted RBP12.95□□□□□ -0.34
SGCA-201ENST00000262018 ZRANB3Q5FWF4 1079 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 CEACAM20Q6UY09 585 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 LIPIQ6XZB0 460 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 PIANPQ8IYJ0 282 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 TMEM151AQ8N4L1 468 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 OR6Y1Q8NGX8 325 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 ZDHHC1Q8WTX9 485 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 NXNL1Q96CM4 212 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 C7orf26Q96N11 449 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 SLC30A1Q9Y6M5 507 aa12.95□□□□□ -0.34
SGCA-201ENST00000262018 ARHGEF17Q96PE2 2063 aaPredicted RBP12.94□□□□□ -0.34
SGCA-201ENST00000262018 ARHGAP10A1A4S6 786 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 CDC14CA4D256 554 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 A8MU76 341 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 A8MX80 341 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 TARM1B6A8C7 271 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 G3V2L1 256 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 PSMD11O00231 422 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 CACNB4O00305 520 aaPredicted RBP12.94□□□□□ -0.34
SGCA-201ENST00000262018 GAPDHSO14556 408 aaPredicted RBP12.94□□□□□ -0.34
SGCA-201ENST00000262018 HNRNPRO43390 633 aaKnown RBP12.94□□□□□ -0.34
SGCA-201ENST00000262018 DNAJB5O75953 348 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 SORBS2O94875 1100 aaKnown RBP12.94□□□□□ -0.34
SGCA-201ENST00000262018 TGDSO95455 350 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 LTA4HP09960 611 aaKnown RBP12.94□□□□□ -0.34
SGCA-201ENST00000262018 SBK3P0C264 359 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 BPIP17213 487 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 CD9P21926 228 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 LHCGRP22888 699 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 GPR3P46089 330 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 ADARP55265 1226 aaKnown RBP12.94□□□□□ -0.34
SGCA-201ENST00000262018 MC2RQ01718 297 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 OCRLQ01968 901 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 BST1Q10588 318 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 STX3Q13277 289 aa12.94□□□□□ -0.34
SGCA-201ENST00000262018 AGERQ15109 404 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms