RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 UPK3BL1B0FP48 263 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 UPK3BL2E5RIL1 263 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 SEPT4O43236 478 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 FZD6O60353 706 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 STK16O75716 305 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 ITGAMP11215 1152 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 CCND3P30281 292 aaPredicted RBP18.86■□□□□ 0.61
SCARB1-201ENST00000261693 MAPK11Q15759 364 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 RFX4Q33E94 735 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 ADGRF1Q5T601 910 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 ARMC12Q5T9G4 340 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 VTCN1Q7Z7D3 282 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 P2RY8Q86VZ1 359 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 ZNF540Q8NDQ6 660 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 RPL3LQ92901 407 aaKnown RBP18.86■□□□□ 0.61
SCARB1-201ENST00000261693 USP7Q93009 1102 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 MYO19Q96H55 970 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 NTMT1Q9BV86 223 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 RNF38Q9H0F5 515 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 ZFYVE1Q9HBF4 777 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 MARCH5Q9NX47 278 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 TRPS1Q9UHF7 1281 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 PCDHGA4Q9Y5G9 962 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 GMPPBQ9Y5P6 360 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 MICAL3Q7RTP6 2002 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 A0A096LPI6 279 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 ZNF840PA6NDX5 716 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 SLC22A1O15245 554 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 DNAJB5O75953 348 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 MT-ND2P03891 347 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 SLC35A2P78381 396 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 MTA1Q13330 715 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 IL18R1Q13478 541 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 FAM26DQ5JW98 314 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 HECTD3Q5T447 861 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 GPRC6AQ5T6X5 926 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 SELENOMQ8WWX9 145 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 ZNF566Q969W8 418 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 SACM1LQ9NTJ5 587 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 CRLS1Q9UJA2 301 aa18.86■□□□□ 0.61
SCARB1-201ENST00000261693 CLDN9O95484 217 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 PTPN6P29350 595 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 ZNF157P51786 506 aaPredicted RBP18.85■□□□□ 0.61
SCARB1-201ENST00000261693 CLCA4Q14CN2 919 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 ZC3H12BQ5HYM0 836 aaKnown RBP18.85■□□□□ 0.61
SCARB1-201ENST00000261693 LRIF1Q5T3J3 769 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 ZCCHC8Q6NZY4 707 aaKnown RBP18.85■□□□□ 0.61
SCARB1-201ENST00000261693 FUT10Q6P4F1 479 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 CADM3Q8N126 398 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 PIH1D2Q8WWB5 315 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 VMP1Q96GC9 406 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 REXO5Q96IC2 774 aaKnown RBP18.85■□□□□ 0.61
SCARB1-201ENST00000261693 HERC2P3Q9BVR0 1158 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 ATAD3AQ9NVI7 634 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 PDP1Q9P0J1 537 aaPredicted RBP18.85■□□□□ 0.61
SCARB1-201ENST00000261693 KRT87PA6NCN2 255 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 M0QX08 132 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 WDR47O94967 919 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 SLC11A1P49279 550 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 ACOX1Q15067 660 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 DGUOKQ16854 277 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 OR4F3Q6IEY1 312 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 OR2T5Q6IEZ7 315 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 SNX20Q7Z614 316 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 MFSD4AQ8N468 514 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 RNF175Q8N4F7 328 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 SETD9Q8NE22 299 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 OR2T29Q8NH02 315 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 YIPF6Q96EC8 236 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 TPRKBQ9Y3C4 175 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 PCDHGB1Q9Y5G3 927 aa18.85■□□□□ 0.61
SCARB1-201ENST00000261693 RFXANKO14593 260 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 TBL1XO60907 577 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 ALDH2P05091 517 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 EPORP19235 508 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 ITGALP20701 1170 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 ACRV1P26436 265 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 CLDN8P56748 225 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 CHRNA6Q15825 494 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 DSG4Q86SJ6 1040 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 PYCR2Q96C36 320 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 ZNF641Q96N77 438 aaPredicted RBP18.84■□□□□ 0.61
SCARB1-201ENST00000261693 DUSP21Q9H596 190 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 RMND5AQ9H871 391 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 ARL15Q9NXU5 204 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 SCN3BQ9NY72 215 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 DNMT3BQ9UBC3 853 aaKnown RBP18.84■□□□□ 0.61
SCARB1-201ENST00000261693 VPS4AQ9UN37 437 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 C2orf78A6NCI8 922 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 PGLSO95336 258 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 KRT6AP02538 564 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 KRT6BP04259 564 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 RPS3P23396 243 aaKnown RBP eCLIP18.84■□□□□ 0.614e-7■■■■□ 20.6
SCARB1-201ENST00000261693 KRT6CP48668 564 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 ARHGDIAP52565 204 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 SMU1Q2TAY7 513 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 CST9Q5W186 159 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 CHST9Q7L1S5 443 aa18.84■□□□□ 0.61
SCARB1-201ENST00000261693 TTC29Q8NA56 475 aaPredicted RBP18.84■□□□□ 0.61
SCARB1-201ENST00000261693 SKA2Q8WVK7 121 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms