RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 GANABQ14697 944 aaKnown RBP15.86■□□□□ 0.13
SREBF1-201ENST00000261646 IFI44LQ53G44 452 aa15.86■□□□□ 0.13
SREBF1-201ENST00000261646 RAB42Q8N4Z0 105 aa15.86■□□□□ 0.13
SREBF1-201ENST00000261646 Q8N9G6 341 aaPredicted RBP15.86■□□□□ 0.13
SREBF1-201ENST00000261646 ATAD1Q8NBU5 361 aa15.86■□□□□ 0.13
SREBF1-201ENST00000261646 POF1BQ8WVV4 589 aa15.86■□□□□ 0.13
SREBF1-201ENST00000261646 SLC38A2Q96QD8 506 aa15.86■□□□□ 0.13
SREBF1-201ENST00000261646 ALPK1Q96QP1 1244 aa15.86■□□□□ 0.13
SREBF1-201ENST00000261646 FNDC11Q9BVV2 318 aa15.86■□□□□ 0.13
SREBF1-201ENST00000261646 ANKMY1Q9P2S6 941 aa15.86■□□□□ 0.13
SREBF1-201ENST00000261646 ZNF451Q9Y4E5 1061 aa15.86■□□□□ 0.13
SREBF1-201ENST00000261646 FAM47E-STBD1D6RA91 191 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 EEDO75530 441 aaKnown RBP15.85■□□□□ 0.13
SREBF1-201ENST00000261646 GADD45GO95257 159 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 PRAMEF1O95521 474 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 ANXA4P09525 319 aaPredicted RBP15.85■□□□□ 0.13
SREBF1-201ENST00000261646 CD52P31358 61 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 ST3GAL4Q11206 333 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 CHIT1Q13231 466 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 LSMEM2Q8N112 164 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 PSD4Q8NDX1 1056 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 CDK5RAP1Q96SZ6 601 aaKnown RBP15.85■□□□□ 0.13
SREBF1-201ENST00000261646 MAF1Q9H063 256 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 R3HDMLQ9H3Y0 253 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 GSTO2Q9H4Y5 243 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 NSUN3Q9H649 340 aaKnown RBP15.85■□□□□ 0.13
SREBF1-201ENST00000261646 TBC1D17Q9HA65 648 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 HSFX1Q9UBD0 423 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 SPIN1Q9Y657 262 aaPredicted RBP15.85■□□□□ 0.13
SREBF1-201ENST00000261646 USP54Q70EL1 1684 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 PGRMC2O15173 223 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 ALDH1A1P00352 501 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 RPL9P32969 192 aaKnown RBP15.85■□□□□ 0.13
SREBF1-201ENST00000261646 ARSDP51689 593 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 GABARAPL2P60520 117 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 CYBRD1Q53TN4 286 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 PPP2R2DQ66LE6 453 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 LARP4Q71RC2 724 aaKnown RBP eCLIP15.85■□□□□ 0.133e-9■■□□□ 13.6
SREBF1-201ENST00000261646 ZNF675Q8TD23 568 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 CSGALNACT1Q8TDX6 532 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 PPCDCQ96CD2 204 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 IFT52Q9Y366 437 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 PLCH1Q4KWH8 1693 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 CCNB2O95067 398 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 VIPP01282 170 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 NR2F1P10589 423 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 SLC2A2P11168 524 aaPredicted RBP15.85■□□□□ 0.13
SREBF1-201ENST00000261646 IFNGR2P38484 337 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 PTGER3P43115 390 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 TAF10Q12962 218 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 DUSP28Q4G0W2 176 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 MSANTD2Q6P1R3 559 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 CERS6Q6ZMG9 384 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 DSG4Q86SJ6 1040 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 C9orf43Q8TAL5 461 aaPredicted RBP15.85■□□□□ 0.13
SREBF1-201ENST00000261646 TEFMQ96QE5 360 aaKnown RBP15.85■□□□□ 0.13
SREBF1-201ENST00000261646 MTERF1Q99551 399 aaKnown RBP15.85■□□□□ 0.13
SREBF1-201ENST00000261646 MTMR10Q9NXD2 777 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 TVP23BQ9NYZ1 205 aa15.85■□□□□ 0.13
SREBF1-201ENST00000261646 GLUD1P00367 558 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 GRK4P32298 578 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 SHMT2P34897 504 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 ATN1P54259 1190 aaPredicted RBP15.84■□□□□ 0.13
SREBF1-201ENST00000261646 GSTM4Q03013 218 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 FPGSQ05932 587 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 IL10RBQ08334 325 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 RASSF6Q6ZTQ3 369 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 KCTD13Q8WZ19 329 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 HSH2DQ96JZ2 352 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 TRIT1Q9H3H1 467 aaKnown RBP15.84■□□□□ 0.13
SREBF1-201ENST00000261646 S1PR4O95977 384 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 CD40LGP29965 261 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 STC1P52823 247 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 SMIM11AP58511 58 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 CDK5R2Q13319 367 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 ZBTB2Q8N680 514 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 OR13F1Q8NGS4 319 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 MRGPRX2Q96LB1 330 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 SMOQ99835 787 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 ASPNQ9BXN1 380 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 DERL2Q9GZP9 239 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 GPN2Q9H9Y4 310 aaPredicted RBP15.84■□□□□ 0.13
SREBF1-201ENST00000261646 ZFYVE1Q9HBF4 777 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 IGSF5Q9NSI5 407 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 DNAJC11Q9NVH1 559 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 KCNE2Q9Y6J6 123 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 TMX2-CTNND1H3BSU7 103 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 CDRT1O95170 752 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 CRYBB1P53674 252 aaPredicted RBP15.84■□□□□ 0.13
SREBF1-201ENST00000261646 ARHGAP1Q07960 439 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 E2F2Q14209 437 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 TRIM71Q2Q1W2 868 aaKnown RBP15.84■□□□□ 0.13
SREBF1-201ENST00000261646 SERPINA9Q86WD7 417 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 AMIGO1Q86WK6 493 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 HJURPQ8NCD3 748 aaPredicted RBP15.84■□□□□ 0.13
SREBF1-201ENST00000261646 REPS1Q96D71 796 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 ZNF599Q96NL3 588 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 EMILIN2Q9BXX0 1053 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 TM9SF3Q9HD45 589 aa15.84■□□□□ 0.13
SREBF1-201ENST00000261646 SMCHD1A6NHR9 2005 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms