RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 MOCOSQ96EN8 888 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 MED8Q96G25 268 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 CNDP2Q96KP4 475 aaKnown RBP15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 TMEM237Q96Q45 408 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 TWSG1Q9GZX9 223 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 CNOT10Q9H9A5 744 aaKnown RBP15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 OR6C2Q9NZP2 312 aa15.3■□□□□ 0.04
CCDC90B-201ENST00000260054 A0A1W2PPV9 198 aa15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 OR6C74A6NCV1 312 aa15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 CBFA2T3O75081 653 aa15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 LDOC1O95751 146 aaPredicted RBP15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 EEF1DP29692 281 aaKnown RBP15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 ALDH4A1P30038 563 aa15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 DAB2P98082 770 aa15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 PCBP2Q15366 365 aaKnown RBP eCLIP15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 PERM1Q5SV97 790 aa15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 SLC22A9Q8IVM8 553 aa15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 OR6C4Q8NGE1 309 aa15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 BAHD1Q8TBE0 780 aaPredicted RBP15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 RSC1A1Q92681 617 aa15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 CCDC126Q96EE4 140 aa15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 CD244Q9BZW8 370 aa15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 INTS7Q9NVH2 962 aaKnown RBP15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 SPHK1Q9NYA1 384 aa15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 KCNK4Q9NYG8 393 aa15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 GVINP1Q7Z2Y8 2422 aa15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 ASXL3Q9C0F0 2248 aa15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 FAM186AA6NE01 2351 aa15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 SPEGQ15772 3267 aa15.29■□□□□ 0.04
CCDC90B-201ENST00000260054 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 FAM221BA6H8Z2 402 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 CASC3O15234 703 aaKnown RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 BIRC5O15392 142 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 CCNT2O60583 730 aaKnown RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 STK16O75716 305 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 UBXN7O94888 489 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 RPS17P08708 135 aaKnown RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 CHRM5P08912 532 aaPredicted RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 PNLIPP16233 465 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 TYRP1P17643 537 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 IMPDH1P20839 514 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 PEBP1P30086 187 aaKnown RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 GPR3P46089 330 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 EPHA4P54764 986 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 OR1D5P58170 312 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 DNAJB13P59910 316 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 HERVK_113P63132 956 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 TSTA3Q13630 321 aaPredicted RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 TERF2Q15554 542 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 ZNF678Q5SXM1 525 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 LIPMQ5VYY2 423 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 RPS27LQ71UM5 84 aaKnown RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 EFL1Q7Z2Z2 1120 aaKnown RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 NUDCD3Q8IVD9 361 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 KLHDC8AQ8IYD2 350 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 OR10G6Q8NH81 332 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 SMPDL3AQ92484 453 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 L3HYPDHQ96EM0 354 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 SGPP1Q9BX95 441 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 ERVK-6Q9BXR3 956 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 CCDC177Q9NQR7 707 aaPredicted RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 ABCF3Q9NUQ8 709 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 FTSJ1Q9UET6 329 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 SLC22A14Q9Y267 594 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 COL5A1P20908 1838 aaPredicted RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 RP1P56715 2156 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 IGHV1OR21-1A0A087WYE8 117 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 ZNF839A8K0R7 811 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 E2F3O00716 465 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 B4GAT1O43505 415 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 PRICKLE3O43900 615 aaPredicted RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 TRIM13O60858 407 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 WDR47O94967 919 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 FGF3P11487 239 aaPredicted RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 CKMT2P17540 419 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 POLR2CP19387 275 aaPredicted RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 PSMB5P28074 263 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 DUSP3P51452 185 aaPredicted RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 NAGLUP54802 743 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 UNC50Q53HI1 259 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 NKAIN2Q5VXU1 208 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 CAPN13Q6MZZ7 669 aaPredicted RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 ZCCHC23Q6ZST2 131 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 SPRED1Q7Z699 444 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 RAB44Q7Z6P3 723 aaPredicted RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 ARFGAP2Q8N6H7 521 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 Q8N9G6 341 aaPredicted RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 FAM76AQ8TAV0 307 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 NAT6Q93015 286 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 NSUN5Q96P11 429 aaKnown RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 OR4K3Q96R72 315 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 C1QTNF3Q9BXJ4 246 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 PITPNM3Q9BZ71 974 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 INTS9Q9NV88 658 aaKnown RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 HRASLS2Q9NWW9 162 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 PCTPQ9UKL6 214 aa15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 TNPO3Q9Y5L0 923 aaKnown RBP15.28■□□□□ 0.04
CCDC90B-201ENST00000260054 PIPSLA2A3N6 862 aa15.27■□□□□ 0.03
CCDC90B-201ENST00000260054 OR5K3A6NET4 321 aa15.27■□□□□ 0.03
CCDC90B-201ENST00000260054 GFRA3O60609 400 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms