RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ATL1Q8WXF7 558 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 PFDN4Q9NQP4 134 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 PRDM6Q9NQX0 595 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 MAN2B1O00754 1011 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 LSM1O15116 133 aaKnown RBP18.34■□□□□ 0.53
TRIM47-201ENST00000254816 CFLARO15519 480 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 ULK1O75385 1050 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 PAX7P23759 505 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 ATP4BP51164 291 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 NEK2P51955 445 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 HMGCS1Q01581 520 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 CHIT1Q13231 466 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 METRNLQ641Q3 311 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 LPCAT4Q643R3 524 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 OGFOD2Q6N063 350 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 IRGCQ6NXR0 463 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 SYTL1Q8IYJ3 562 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 KYQ8NBH2 561 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 ECSITQ9BQ95 431 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 OSGEPL1Q9H4B0 414 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 LMAN1LQ9HAT1 526 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 SUFUQ9UMX1 484 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 KCNK6Q9Y257 313 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 CCL27Q9Y4X3 112 aa18.34■□□□□ 0.53
TRIM47-201ENST00000254816 KCNE1BA0A087WTH5 132 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 DPPA5A6NC42 116 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 E7EQ34 232 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 CLGNO14967 610 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 PDYNP01213 254 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 C7P10643 843 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 MRPS35P82673 323 aaKnown RBP18.33■□□□□ 0.53
TRIM47-201ENST00000254816 PRKG2Q13237 762 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 RPS6KA2Q15349 733 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 CAPRIN2Q6IMN6 1127 aaKnown RBP18.33■□□□□ 0.53
TRIM47-201ENST00000254816 SPATA19Q7Z5L4 167 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 MIER2Q8N344 545 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 FBXO15Q8NCQ5 510 aaPredicted RBP18.33■□□□□ 0.53
TRIM47-201ENST00000254816 OR9A1PQ8NGU1 263 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 OR56A3Q8NH54 315 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 SPDL1Q96EA4 605 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 IL17FQ96PD4 163 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 CCT7Q99832 543 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 ITM2CQ9NQX7 267 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 SLC17A4Q9Y2C5 497 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 TDRKHQ9Y2W6 561 aaKnown RBP18.33■□□□□ 0.53
TRIM47-201ENST00000254816 GPSM3Q9Y4H4 160 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 GPR45Q9Y5Y3 372 aa18.33■□□□□ 0.53
TRIM47-201ENST00000254816 DNAH14Q0VDD8 3507 aa18.33■□□□□ 0.52
TRIM47-201ENST00000254816 A6NHS1 94 aa18.33■□□□□ 0.52
TRIM47-201ENST00000254816 CACNB4O00305 520 aaPredicted RBP18.33■□□□□ 0.52
TRIM47-201ENST00000254816 THOP1P52888 689 aa18.33■□□□□ 0.52
TRIM47-201ENST00000254816 ERVK-8P63133 956 aa18.33■□□□□ 0.52
TRIM47-201ENST00000254816 GAS6Q14393 721 aa18.33■□□□□ 0.52
TRIM47-201ENST00000254816 TCEA2Q15560 299 aa18.33■□□□□ 0.52
TRIM47-201ENST00000254816 DUS1LQ6P1R4 473 aaKnown RBP18.33■□□□□ 0.52
TRIM47-201ENST00000254816 RNF175Q8N4F7 328 aa18.33■□□□□ 0.52
TRIM47-201ENST00000254816 C2orf73Q8N5S3 287 aaPredicted RBP18.33■□□□□ 0.52
TRIM47-201ENST00000254816 RNF148Q8N7C7 305 aa18.33■□□□□ 0.52
TRIM47-201ENST00000254816 OR2T34Q8NGX1 318 aa18.33■□□□□ 0.52
TRIM47-201ENST00000254816 JADE3Q92613 823 aa18.33■□□□□ 0.52
TRIM47-201ENST00000254816 TFGQ92734 400 aaPredicted RBP18.33■□□□□ 0.52
TRIM47-201ENST00000254816 TEX37Q96LM6 180 aa18.33■□□□□ 0.52
TRIM47-201ENST00000254816 CDRT15Q96T59 188 aa18.33■□□□□ 0.52
TRIM47-201ENST00000254816 POLMQ9NP87 494 aaPredicted RBP18.33■□□□□ 0.52
TRIM47-201ENST00000254816 AIG1Q9NVV5 245 aa18.33■□□□□ 0.52
TRIM47-201ENST00000254816 CYP8B1Q9UNU6 501 aa18.33■□□□□ 0.52
TRIM47-201ENST00000254816 WDR37Q9Y2I8 494 aa18.33■□□□□ 0.52
TRIM47-201ENST00000254816 DNMT3AQ9Y6K1 912 aaPredicted RBP18.33■□□□□ 0.52
TRIM47-201ENST00000254816 FBP2O00757 339 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 SNRPB2P08579 225 aaKnown RBP18.32■□□□□ 0.52
TRIM47-201ENST00000254816 CD22P20273 847 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 GNPDA1P46926 289 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 CLCNKAP51800 687 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 TBPL1P62380 186 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 SFSWAPQ12872 951 aaKnown RBP18.32■□□□□ 0.52
TRIM47-201ENST00000254816 RPA4Q13156 261 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 AP5B1Q2VPB7 878 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 RFTN2Q52LD8 501 aaPredicted RBP18.32■□□□□ 0.52
TRIM47-201ENST00000254816 XKR6Q5GH73 641 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 TPRG1LQ5T0D9 272 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 SUSD1Q6UWL2 747 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 C16orf89Q6UX73 402 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 ZNF687Q8N1G0 1237 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 DEFB123Q8N688 67 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 USP7Q93009 1102 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 UHRF1Q96T88 793 aaPredicted RBP18.32■□□□□ 0.52
TRIM47-201ENST00000254816 SLC29A3Q9BZD2 475 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 FGF22Q9HCT0 170 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 KRBA1A5PL33 1030 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 LRRC72A6NJI9 287 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 GPR89AB7ZAQ6 455 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 NR5A2O00482 541 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 GPR89BP0CG08 455 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 IDO1P14902 403 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 DPP6P42658 865 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 CCR3P51677 355 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 IRF8Q02556 426 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 GSTA3Q16772 222 aa18.32■□□□□ 0.52
TRIM47-201ENST00000254816 HABP4Q5JVS0 413 aaKnown RBP18.32■□□□□ 0.52
TRIM47-201ENST00000254816 UNC5DQ6UXZ4 953 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms