RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 PRPS2P11908 318 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 PGS1Q32NB8 556 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 GFM2Q969S9 779 aaKnown RBP19■□□□□ 0.63
CDC42EP1-201ENST00000249014 NCLNQ969V3 563 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 CMTM7Q96FZ5 175 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 LINC00597Q9H2U6 94 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 LTB4R2Q9NPC1 389 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 GPRC5BQ9NZH0 403 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 PKD2L2Q9NZM6 624 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 PFN3P60673 137 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 PPP1R8Q12972 351 aaKnown RBP19■□□□□ 0.63
CDC42EP1-201ENST00000249014 SP140Q13342 867 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 C1orf53Q5VUE5 145 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 Q6ZVL8 140 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 ZNF551Q7Z340 670 aaPredicted RBP19■□□□□ 0.63
CDC42EP1-201ENST00000249014 ELMO1Q92556 727 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 APOLD1Q96LR9 279 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 TOR3AQ9H497 397 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 DNAJC11Q9NVH1 559 aa19■□□□□ 0.63
CDC42EP1-201ENST00000249014 IFT80Q9P2H3 777 aaPredicted RBP19■□□□□ 0.63
CDC42EP1-201ENST00000249014 NUP214P35658 2090 aaPredicted RBP19■□□□□ 0.63
CDC42EP1-201ENST00000249014 TMEM202A6NGA9 273 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 WASH3PC4AMC7 463 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 NOBOXO60393 691 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 C1QCP02747 245 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 RETP07949 1114 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 MYCLP1P12525 358 aaPredicted RBP18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 TYRP14679 529 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 AMD1P17707 334 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 CYP2A7P20853 494 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 POLR2LP62875 67 aaKnown RBP18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 SLC14A1Q13336 389 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 TEAD2Q15562 447 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 FRG2Q64ET8 278 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 KCTD8Q6ZWB6 473 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 CYP2U1Q7Z449 544 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 HOMEZQ8IX15 550 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 DNAJB8Q8NHS0 232 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 SORCS1Q8WY21 1168 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 IRF7Q92985 503 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 TESCQ96BS2 214 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 FAM120BQ96EK7 910 aaKnown RBP18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 ITCHQ96J02 903 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 FRG2BQ96QU4 278 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 FAM83DQ9H4H8 585 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 TIMMDC1Q9NPL8 285 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 FAM8A1Q9UBU6 413 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 OR2AG2A6NM03 316 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 C16orf96A6NNT2 1141 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 SLC16A5O15375 505 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 HPRP00739 348 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 SERPINA1P01009 418 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 ADH1AP07327 375 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 CD22P20273 847 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 POLR2IP36954 125 aaKnown RBP18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 ETV3P41162 512 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 HALP42357 657 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 HLCSP50747 726 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 PPP2R2BQ00005 443 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 CHIT1Q13231 466 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 RAB39AQ14964 217 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 TMEM179BQ7Z7N9 219 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 GPR180Q86V85 440 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 TMEM132CQ8N3T6 1108 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 KLHL23Q8NBE8 558 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 MCOLN3Q8TDD5 553 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 C12orf43Q96C57 262 aaKnown RBP18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 PHF12Q96QT6 1004 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 HHIPQ96QV1 700 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 OSBPL10Q9BXB5 764 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 EBPLQ9BY08 206 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 YTHDF1Q9BYJ9 559 aaKnown RBP18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 OSBPL6Q9BZF3 934 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 POLR1BQ9H9Y6 1135 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 CXorf21Q9HAI6 301 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 AP3M1Q9Y2T2 418 aa18.99■□□□□ 0.63
CDC42EP1-201ENST00000249014 PABPN1LA6NDY0 278 aaKnown RBP18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 FADS2P1A8MWK0 482 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 NPIPB8E9PQR5 432 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 MOSPD3O75425 235 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 LEFTY1O75610 366 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 PFKLP17858 780 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 BRAT1Q6PJG6 821 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 OR10Q1Q8NGQ4 319 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 CYB5D2Q8WUJ1 264 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 MBOAT4Q96T53 435 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 RMND5AQ9H871 391 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 MTCL1Q9Y4B5 1905 aaKnown RBP18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 UPK3BL1B0FP48 263 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 UPK3BL2E5RIL1 263 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 RFPL2O75678 378 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 ZNF30P17039 623 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 VIPR1P32241 457 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 AP1S2P56377 157 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 OR4F3Q6IEY1 312 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 NOXRED1Q6NXP6 359 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 OTOP2Q7RTS6 562 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 RASGRP3Q8IV61 690 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 FOXJ1Q92949 421 aa18.98■□□□□ 0.63
CDC42EP1-201ENST00000249014 AMBRA1Q9C0C7 1298 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms