RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 LMNTD1Q8N9Z9 388 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 OR9A1PQ8NGU1 263 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 OR1L3Q8NH93 324 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 FAM45AQ8TCE6 357 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 ASB11Q8WXH4 323 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 STARD8Q92502 1023 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 TTC9Q92623 222 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 TRIM44Q96DX7 344 aaPredicted RBP12.31□□□□□ -0.44
VPREB3-201ENST00000248948 SLC12A9Q9BXP2 914 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 LHX9Q9NQ69 397 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 MOCS1Q9NZB8 636 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 SLC17A6Q9P2U8 582 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 TSR3Q9UJK0 312 aaKnown RBP12.31□□□□□ -0.44
VPREB3-201ENST00000248948 PCDHGA6Q9Y5G7 932 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 KLK4Q9Y5K2 254 aa12.31□□□□□ -0.44
VPREB3-201ENST00000248948 MDC1Q14676 2089 aaKnown RBP12.31□□□□□ -0.44
VPREB3-201ENST00000248948 E7EQ34 232 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 GFYI3L273 518 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 TK2O00142 265 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 AHSGP02765 367 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 C8GP07360 202 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 HBQ1P09105 142 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 GSTA2P09210 222 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 FDXRP22570 491 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 MCM3P25205 808 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 RORAP35398 523 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 DLSTP36957 453 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 ZIC1Q15915 447 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 KIAA1614Q5VZ46 1190 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 TAX1BP1Q86VP1 789 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 GPR135Q8IZ08 494 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 MYO1HQ8N1T3 1032 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 OR2L3Q8NG85 312 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 PYROXD1Q8WU10 500 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 SMPDL3AQ92484 453 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 SEC14L1Q92503 715 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 N4BP2L2Q92802 583 aaPredicted RBP12.3□□□□□ -0.44
VPREB3-201ENST00000248948 CATSPER2Q96P56 530 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 DPH2Q9BQC3 489 aaPredicted RBP12.3□□□□□ -0.44
VPREB3-201ENST00000248948 FAM129AQ9BZQ8 928 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 KLHL25Q9H0H3 589 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 ACTR5Q9H9F9 607 aaPredicted RBP12.3□□□□□ -0.44
VPREB3-201ENST00000248948 FAM60AQ9NP50 221 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 ENAMQ9NRM1 1142 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 ANKMY1Q9P2S6 941 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 CIDEBQ9UHD4 219 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 SERTAD3Q9UJW9 196 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 KCND3Q9UK17 655 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 CROTQ9UKG9 612 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 PADI1Q9ULC6 663 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 SRPK3Q9UPE1 567 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 AP1M2Q9Y6Q5 423 aa12.3□□□□□ -0.44
VPREB3-201ENST00000248948 KALRNO60229 2985 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 A0A1W2PPV9 198 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 TARM1B6A8C7 271 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 H3BMH7 237 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 SLC16A5O15375 505 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 ZSCAN9O15535 394 aaPredicted RBP12.29□□□□□ -0.44
VPREB3-201ENST00000248948 OR2B3O76000 313 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 CCNDBP1O95273 360 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 PNLIPRP1P54315 467 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 CDKN2DP55273 166 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 TIAL1Q01085 375 aaKnown RBP eCLIP12.29□□□□□ -0.44
VPREB3-201ENST00000248948 CDC20Q12834 499 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 GPS2Q13227 327 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 PDAP1Q13442 181 aaKnown RBP12.29□□□□□ -0.44
VPREB3-201ENST00000248948 DNASE1L3Q13609 305 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 SF1Q15637 639 aaKnown RBP12.29□□□□□ -0.44
VPREB3-201ENST00000248948 ZC3H12BQ5HYM0 836 aaKnown RBP12.29□□□□□ -0.44
VPREB3-201ENST00000248948 HECTD2Q5U5R9 776 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 ZDHHC24Q6UX98 284 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 PIWIL4Q7Z3Z4 852 aaKnown RBP12.29□□□□□ -0.44
VPREB3-201ENST00000248948 ZC3HC1Q86WB0 502 aaKnown RBP12.29□□□□□ -0.44
VPREB3-201ENST00000248948 DNAJC22Q8N4W6 341 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 GPATCH11Q8N954 259 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 MNS1Q8NEH6 495 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 OR2A1Q8NGT9 310 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 FBXO25Q8TCJ0 367 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 CT55Q8WUE5 264 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 CDKL2Q92772 493 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 SAYSD1Q9NPB0 183 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.29□□□□□ -0.44
VPREB3-201ENST00000248948 RALYQ9UKM9 306 aaKnown RBP12.29□□□□□ -0.44
VPREB3-201ENST00000248948 PLCL2Q9UPR0 1127 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 ATRXP46100 2492 aa12.29□□□□□ -0.44
VPREB3-201ENST00000248948 KRT87PA6NCN2 255 aa12.28□□□□□ -0.44
VPREB3-201ENST00000248948 ZBTB14O43829 449 aa12.28□□□□□ -0.44
VPREB3-201ENST00000248948 SLC16A8O95907 504 aa12.28□□□□□ -0.44
VPREB3-201ENST00000248948 RECKO95980 971 aa12.28□□□□□ -0.44
VPREB3-201ENST00000248948 NTRK1P04629 796 aa12.28□□□□□ -0.44
VPREB3-201ENST00000248948 KLK3P07288 261 aaPredicted RBP12.28□□□□□ -0.44
VPREB3-201ENST00000248948 ZNF37AP17032 561 aaPredicted RBP12.28□□□□□ -0.44
VPREB3-201ENST00000248948 PSMB5P28074 263 aa12.28□□□□□ -0.44
VPREB3-201ENST00000248948 CMPK1P30085 196 aa12.28□□□□□ -0.44
VPREB3-201ENST00000248948 PLTPP55058 493 aa12.28□□□□□ -0.44
VPREB3-201ENST00000248948 DEFB110Q30KQ9 67 aa12.28□□□□□ -0.44
VPREB3-201ENST00000248948 SOWAHCQ53LP3 525 aaPredicted RBP12.28□□□□□ -0.44
VPREB3-201ENST00000248948 TLDC1Q6P9B6 456 aa12.28□□□□□ -0.44
VPREB3-201ENST00000248948 PAQR3Q6TCH7 311 aa12.28□□□□□ -0.44
VPREB3-201ENST00000248948 PCSK4Q6UW60 755 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms