RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 RCC1LQ96I51 464 aaKnown RBP3.43□□□□□ -1.86
PHTF2-201ENST00000248550 FAM167BQ9BTA0 163 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 KLF16Q9BXK1 252 aaPredicted RBP3.43□□□□□ -1.86
PHTF2-201ENST00000248550 MS4A7Q9GZW8 240 aaPredicted RBP3.43□□□□□ -1.86
PHTF2-201ENST00000248550 ASB8Q9H765 288 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 GLRX2Q9NS18 164 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 MS4A12Q9NXJ0 267 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 KLHL28Q9NXS3 571 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 FAM153AQ9UHL3 310 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 PPIEQ9UNP9 301 aaKnown RBP3.43□□□□□ -1.86
PHTF2-201ENST00000248550 ZFR2Q9UPR6 939 aaKnown RBP3.43□□□□□ -1.86
PHTF2-201ENST00000248550 POLR1DQ9Y2S0 133 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 NFS1Q9Y697 457 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 ZNF780BQ9Y6R6 833 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 SPTY2D1-AS1A0A0U1RR47 76 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 FAM221AA4D161 298 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 E9PLN8 166 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 M0R3G1 203 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 SMAD9O15198 467 aaKnown RBP3.43□□□□□ -1.86
PHTF2-201ENST00000248550 YY2O15391 372 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 SPRY1O43609 319 aaPredicted RBP3.43□□□□□ -1.86
PHTF2-201ENST00000248550 SLITRK3O94933 977 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 MATN4O95460 622 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 SEC24AO95486 1093 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 LPOP22079 712 aaPredicted RBP3.43□□□□□ -1.86
PHTF2-201ENST00000248550 NMT1P30419 496 aaKnown RBP3.43□□□□□ -1.86
PHTF2-201ENST00000248550 LGALS4P56470 323 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 SLC13A2Q13183 592 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 C1DQ13901 141 aaKnown RBP3.43□□□□□ -1.86
PHTF2-201ENST00000248550 HLTFQ14527 1009 aaKnown RBP eCLIP3.43□□□□□ -1.86
PHTF2-201ENST00000248550 PPP1R7Q15435 360 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 CNGA3Q16281 694 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 NT5DC1Q5TFE4 455 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 ATG16L1Q676U5 607 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 BEND5Q7L4P6 421 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 RRM2BQ7LG56 351 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 C11orf96Q7Z7L8 435 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 NT5DC3Q86UY8 548 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 RPS19BP1Q86WX3 136 aaKnown RBP3.43□□□□□ -1.86
PHTF2-201ENST00000248550 TCAIMQ8N3R3 496 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 RCBTB1Q8NDN9 531 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 PIK3C3Q8NEB9 887 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 ACVR1CQ8NER5 493 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 BLOC1S5Q8TDH9 187 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 MVB12AQ96EY5 273 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 PTCD3Q96EY7 689 aaKnown RBP3.43□□□□□ -1.86
PHTF2-201ENST00000248550 C14orf79Q96F83 325 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 ZNF845Q96IR2 970 aaPredicted RBP3.43□□□□□ -1.86
PHTF2-201ENST00000248550 ADGRG7Q96K78 797 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 HIST1H2AAQ96QV6 131 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 CYP2S1Q96SQ9 504 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 VKORC1Q9BQB6 163 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 REEP2Q9BRK0 252 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 CDH20Q9HBT6 801 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 CISHQ9NSE2 258 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 ATP23Q9Y6H3 246 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 KCNE2Q9Y6J6 123 aa3.43□□□□□ -1.86
PHTF2-201ENST00000248550 TTC26A0AVF1 554 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 ISPDA4D126 451 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 LRRD1A4D1F6 860 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 KRT87PA6NCN2 255 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 OR5H15A6NDH6 313 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 K7ESF4 209 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 GAPDHSO14556 408 aaPredicted RBP3.42□□□□□ -1.86
PHTF2-201ENST00000248550 PLRG1O43660 514 aaKnown RBP3.42□□□□□ -1.86
PHTF2-201ENST00000248550 CTSVO60911 334 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 RECQL5O94762 991 aaPredicted RBP3.42□□□□□ -1.86
PHTF2-201ENST00000248550 PIGRP01833 764 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 PCSK2P16519 638 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 UGT1A4P22310 534 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 OPRD1P41143 372 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 RPS15AP62244 130 aaKnown RBP3.42□□□□□ -1.86
PHTF2-201ENST00000248550 PPIAP62937 165 aaKnown RBP3.42□□□□□ -1.86
PHTF2-201ENST00000248550 PCID2Q5JVF3 399 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 PRSS36Q5K4E3 855 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 C1orf185Q5T7R7 199 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 GUSBP11Q6P575 273 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 CRYBG2Q8N1P7 616 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 C10orf53Q8N6V4 93 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 ZBTB8BQ8NAP8 495 aaPredicted RBP3.42□□□□□ -1.86
PHTF2-201ENST00000248550 ZNF527Q8NB42 609 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 TRPV3Q8NET8 790 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 ZNF398Q8TD17 642 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 TMEM234Q8WY98 164 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.42□□□□□ -1.865e-9■■■■■ 39.9
PHTF2-201ENST00000248550 MMABQ96EY8 250 aaPredicted RBP3.42□□□□□ -1.86
PHTF2-201ENST00000248550 CLEC4MQ9H2X3 399 aaPredicted RBP3.42□□□□□ -1.86
PHTF2-201ENST00000248550 GOLGA2P5Q9HBQ8 144 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 LHX9Q9NQ69 397 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 P4HTMQ9NXG6 502 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 GCNT4Q9P109 453 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 COL20A1Q9P218 1284 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 USP36Q9P275 1121 aaKnown RBP3.42□□□□□ -1.86
PHTF2-201ENST00000248550 BAG5Q9UL15 447 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 PRAMEF33A0A0G2JMD5 474 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 A0A1B0GX78 115 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 PLSCR5A0PG75 271 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 OR6C74A6NCV1 312 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 BTNL10A8MVZ5 291 aa3.42□□□□□ -1.86
PHTF2-201ENST00000248550 PRAMEF10O60809 474 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms