RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 OR1A2Q9Y585 309 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 PABPN1LA6NDY0 278 aaKnown RBP22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 NME4O00746 187 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 RNGTTO60942 597 aaKnown RBP22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 EEDO75530 441 aaKnown RBP22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 PDYNP01213 254 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 ZNF8P17098 575 aaPredicted RBP22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 MRPS22P82650 360 aaKnown RBP22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 TMEM259Q4ZIN3 620 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 EOGTQ5NDL2 527 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 C6orf10Q5SRN2 563 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 GPR153Q6NV75 609 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 DOK6Q6PKX4 331 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 ZFAND4Q86XD8 727 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 TRAPPC5Q8IUR0 188 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 HMGB4Q8WW32 186 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 HOPXQ9BPY8 73 aaPredicted RBP22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 ACPTQ9BZG2 426 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 INTS7Q9NVH2 962 aaKnown RBP22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 TMEM45AQ9NWC5 275 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 MCM8Q9UJA3 840 aa22.69■■□□□ 1.22
SYNGR3-201ENST00000248121 SLC6A2P23975 617 aa22.68■■□□□ 1.22
SYNGR3-201ENST00000248121 ACSL1P33121 698 aa22.68■■□□□ 1.22
SYNGR3-201ENST00000248121 MUM1Q2TAK8 710 aa22.68■■□□□ 1.22
SYNGR3-201ENST00000248121 PLA2G4EQ3MJ16 856 aa22.68■■□□□ 1.22
SYNGR3-201ENST00000248121 TIGD2Q4W5G0 525 aa22.68■■□□□ 1.22
SYNGR3-201ENST00000248121 HABP4Q5JVS0 413 aaKnown RBP22.68■■□□□ 1.22
SYNGR3-201ENST00000248121 SAMD4BQ5PRF9 694 aaKnown RBP22.68■■□□□ 1.22
SYNGR3-201ENST00000248121 SLC15A3Q8IY34 581 aa22.68■■□□□ 1.22
SYNGR3-201ENST00000248121 MSANTD3Q96H12 275 aa22.68■■□□□ 1.22
SYNGR3-201ENST00000248121 COX14Q96I36 57 aa22.68■■□□□ 1.22
SYNGR3-201ENST00000248121 FOXQ1Q9C009 403 aa22.68■■□□□ 1.22
SYNGR3-201ENST00000248121 ZCCHC2Q9C0B9 1178 aaKnown RBP22.68■■□□□ 1.22
SYNGR3-201ENST00000248121 STOX2Q9P2F5 926 aaPredicted RBP22.68■■□□□ 1.22
SYNGR3-201ENST00000248121 DNAH14Q0VDD8 3507 aa22.68■■□□□ 1.22
SYNGR3-201ENST00000248121 CCDC154A6NI56 674 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 MAP4P27816 1152 aaKnown RBP22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 CDK3Q00526 305 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 ZP2Q05996 745 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 INPP5AQ14642 412 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 CRTC3Q6UUV7 619 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 ZNF852Q6ZMS4 543 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 CFAP206Q8IYR0 622 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 NAF1Q96HR8 494 aaKnown RBP22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 MRPL40Q9NQ50 206 aaKnown RBP22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 CMTM6Q9NX76 183 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 SLAMF8Q9P0V8 285 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 TBC1D3DA0A087WVF3 549 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 TBC1D3IA0A087WXS9 549 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 TBC1D3EA0A087X179 549 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 TBC1D3KA0A087X1G2 549 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 TBC1D3FA6NER0 549 aaPredicted RBP22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 TBC1D3LB9A6J9 549 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 KRT6AP02538 564 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 KRT6BP04259 564 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 TBC1D3HP0C7X1 549 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 GNPDA1P46926 289 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 KRT6CP48668 564 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 NEK2P51955 445 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 PRKG2Q13237 762 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 KIAA0040Q15053 153 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 TBC1D3GQ6DHY5 549 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 TBC1D3CQ6IPX1 549 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 TBC1D3Q8IZP1 549 aaPredicted RBP22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 HIC2Q96JB3 615 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 PKP4Q99569 1192 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 C1QTNF2Q9BXJ5 285 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 TRIM8Q9BZR9 551 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 EBF1Q9UH73 591 aa22.67■■□□□ 1.22
SYNGR3-201ENST00000248121 H3BM21 787 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 DNAJA2O60884 412 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 CATP04040 527 aaKnown RBP22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 CD22P20273 847 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 TPMTP51580 245 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 FZD5Q13467 585 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 PTGR1Q14914 329 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 SMU1Q2TAY7 513 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 AGTRAPQ6RW13 159 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 ADAMTSL4Q6UY14 1074 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 C11orf96Q7Z7L8 435 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 LINC00615Q96LM1 132 aaPredicted RBP22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 CCDC138Q96M89 665 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 LRTM1Q9HBL6 345 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 GID8Q9NWU2 228 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 PSMD13Q9UNM6 376 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 LIN7AO14910 233 aaPredicted RBP22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 SLC16A8O95907 504 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 JAK1P23458 1154 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 IMPA1P29218 277 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 IGFALSP35858 605 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 RPS21P63220 83 aaKnown RBP22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 AGERQ15109 404 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 THOC6Q86W42 341 aaKnown RBP22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 SELENOMQ8WWX9 145 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 OR4K3Q96R72 315 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 LEF1Q9UJU2 399 aaPredicted RBP22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 PCDHA9Q9Y5H5 950 aa22.66■■□□□ 1.22
SYNGR3-201ENST00000248121 C7P10643 843 aa22.65■■□□□ 1.22
SYNGR3-201ENST00000248121 ACADMP11310 421 aa22.65■■□□□ 1.22
SYNGR3-201ENST00000248121 FOXM1Q08050 763 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms