RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 PI15O43692 258 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 ATG13O75143 517 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 PRSS23O95084 383 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 PGLSO95336 258 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 HPRP00739 348 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 HMBSP08397 361 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 ERP29P30040 261 aaKnown RBP19.4■□□□□ 0.7
HOXC13-201ENST00000243056 SCNN1AP37088 669 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 PBX2P40425 430 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 CDK5R2Q13319 367 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 ZNF691Q5VV52 312 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 LETMD1Q6P1Q0 360 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 MIB1Q86YT6 1006 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 PLCZ1Q86YW0 608 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 TP53INP2Q8IXH6 220 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.4■□□□□ 0.7
HOXC13-201ENST00000243056 MRPL17Q9NRX2 175 aaKnown RBP19.4■□□□□ 0.7
HOXC13-201ENST00000243056 SLC12A8A0AV02 714 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 BBIP1A8MTZ0 92 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 PLD2O14939 933 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 ARHGEF9O43307 516 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 NPHS1O60500 1241 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 ZNF254O75437 659 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 MOCS2O96007 188 aaPredicted RBP19.4■□□□□ 0.7
HOXC13-201ENST00000243056 POLBP06746 335 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 FOSL1P15407 271 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 ZNF30P17039 623 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 OLIG2Q13516 323 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 KIAA1324Q6UXG2 1013 aaKnown RBP19.4■□□□□ 0.7
HOXC13-201ENST00000243056 CYHR1Q6ZMK1 362 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 PTRH1Q86Y79 214 aaKnown RBP19.4■□□□□ 0.7
HOXC13-201ENST00000243056 SPATA6LQ8N4H0 392 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 TXNDC5Q8NBS9 432 aaKnown RBP19.4■□□□□ 0.7
HOXC13-201ENST00000243056 RNF34Q969K3 372 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 ZNF566Q969W8 418 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 DOCK6Q96HP0 2047 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 ITCHQ96J02 903 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 SIK2Q9H0K1 926 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 MCCC2Q9HCC0 563 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 CPNE7Q9UBL6 633 aa19.4■□□□□ 0.7
HOXC13-201ENST00000243056 DIMT1Q9UNQ2 313 aaKnown RBP19.4■□□□□ 0.7
HOXC13-201ENST00000243056 FAM92AA1XBS5 289 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 CLDN24A6NM45 220 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 SCAMP3O14828 347 aaKnown RBP19.39■□□□□ 0.69
HOXC13-201ENST00000243056 CA3P07451 260 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 MSH3P20585 1137 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 IRS1P35568 1242 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 CSRP3P50461 194 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 PLPP4Q5VZY2 271 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 MICU2Q8IYU8 434 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 CENPLQ8N0S6 344 aaPredicted RBP19.39■□□□□ 0.69
HOXC13-201ENST00000243056 PJA1Q8NG27 643 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 ZNF669Q96BR6 464 aaPredicted RBP19.39■□□□□ 0.69
HOXC13-201ENST00000243056 LRRC58Q96CX6 371 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 MSANTD3Q96H12 275 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 VPS39Q96JC1 886 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 HTATIP2Q9BUP3 242 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 TRAF4Q9BUZ4 470 aaPredicted RBP19.39■□□□□ 0.69
HOXC13-201ENST00000243056 TKTL2Q9H0I9 626 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 TRMT6Q9UJA5 497 aaKnown RBP19.39■□□□□ 0.69
HOXC13-201ENST00000243056 FZD10Q9ULW2 581 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 BACE2Q9Y5Z0 518 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 LOC100130705A0A1B0GUX0 176 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 LINC01553A4QN01 128 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 CXCL14O95715 111 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 ANGPTL1O95841 491 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 LCKP06239 509 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 MAGEA11P43364 429 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 LIPEQ05469 1076 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 EFEMP1Q12805 493 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 C6orf132Q5T0Z8 1188 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 ARSKQ6UWY0 536 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 BNIPLQ7Z465 357 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 LIX1LQ8IVB5 337 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 ZNF557Q8N988 423 aaPredicted RBP19.39■□□□□ 0.69
HOXC13-201ENST00000243056 TTC16Q8NEE8 873 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 CLP1Q92989 425 aaKnown RBP19.39■□□□□ 0.69
HOXC13-201ENST00000243056 FBXW5Q969U6 566 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.39■□□□□ 0.69
HOXC13-201ENST00000243056 USB1Q9BQ65 265 aaKnown RBP19.39■□□□□ 0.69
HOXC13-201ENST00000243056 TCF25Q9BQ70 676 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 ACOT13Q9NPJ3 140 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 SLC23A1Q9UHI7 598 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 KCNE2Q9Y6J6 123 aa19.39■□□□□ 0.69
HOXC13-201ENST00000243056 NEMP2A6NFY4 417 aa19.38■□□□□ 0.69
HOXC13-201ENST00000243056 SLC38A8A6NNN8 435 aa19.38■□□□□ 0.69
HOXC13-201ENST00000243056 PRRG1O14668 218 aa19.38■□□□□ 0.69
HOXC13-201ENST00000243056 CDK14O94921 469 aa19.38■□□□□ 0.69
HOXC13-201ENST00000243056 ABLIM3O94929 683 aa19.38■□□□□ 0.69
HOXC13-201ENST00000243056 SLC35A2P78381 396 aa19.38■□□□□ 0.69
HOXC13-201ENST00000243056 ZMYND11Q15326 602 aa19.38■□□□□ 0.69
HOXC13-201ENST00000243056 B3GNT8Q7Z7M8 397 aa19.38■□□□□ 0.69
HOXC13-201ENST00000243056 DNAJB14Q8TBM8 379 aa19.38■□□□□ 0.69
HOXC13-201ENST00000243056 RDH12Q96NR8 316 aa19.38■□□□□ 0.69
HOXC13-201ENST00000243056 ACOX2Q99424 681 aa19.38■□□□□ 0.69
HOXC13-201ENST00000243056 ZBP1Q9H171 429 aa19.38■□□□□ 0.69
HOXC13-201ENST00000243056 EVA1BQ9NVM1 165 aa19.38■□□□□ 0.69
HOXC13-201ENST00000243056 EVLQ9UI08 416 aaPredicted RBP19.38■□□□□ 0.69
HOXC13-201ENST00000243056 MKLN1Q9UL63 735 aa19.38■□□□□ 0.69
HOXC13-201ENST00000243056 CIB4A0PJX0 185 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms