RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 SPNP16150 400 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 HOXB9P17482 250 aaPredicted RBP15.13■□□□□ 0.01
DDX55-201ENST00000238146 CDKN2CP42773 168 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 TUBA1BP68363 451 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 ABHD18Q0P651 414 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 TUBA1AQ71U36 451 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 Q8N9G6 341 aaPredicted RBP15.13■□□□□ 0.01
DDX55-201ENST00000238146 BRI3BPQ8WY22 251 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 TPK1Q9H3S4 243 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 PCDHB8Q9UN66 801 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 SAMD4AQ9UPU9 718 aaKnown RBP15.13■□□□□ 0.01
DDX55-201ENST00000238146 RAI2Q9Y5P3 530 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 CEP350Q5VT06 3117 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 SAGE2PA6NJ88 616 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 hCG_2039718K7EN88 272 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 PCDHGA12O60330 932 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 CCNDBP1O95273 360 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 DLGAP3O95886 979 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 PTPN2P17706 415 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 TCEA1P23193 301 aaKnown RBP15.13■□□□□ 0.01
DDX55-201ENST00000238146 CD52P31358 61 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 DNAJA1P31689 397 aaKnown RBP15.13■□□□□ 0.01
DDX55-201ENST00000238146 PPP3CCP48454 512 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 SLC14A1Q13336 389 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 PROX2Q3B8N5 592 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 PRSS36Q5K4E3 855 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 KIAA1614Q5VZ46 1190 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 TUBA3EQ6PEY2 450 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 TMEM132CQ8N3T6 1108 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 FAM83FQ8NEG4 500 aaPredicted RBP15.13■□□□□ 0.01
DDX55-201ENST00000238146 NLGN2Q8NFZ4 835 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 DNAJB8Q8NHS0 232 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 IPCEF1Q8WWN9 437 aaPredicted RBP15.13■□□□□ 0.01
DDX55-201ENST00000238146 FBXO32Q969P5 355 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 ITPAQ9BY32 194 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 MAGEH1Q9H213 219 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 PRDM8Q9NQV8 689 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 PADI3Q9ULW8 664 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 SLC45A1Q9Y2W3 748 aa15.13■□□□□ 0.01
DDX55-201ENST00000238146 MANBAO00462 879 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 AIREO43918 545 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 PGLSO95336 258 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 FPR1P21462 350 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 UGT2B10P36537 528 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 NR4A2P43354 598 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 CREMQ03060 361 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 FAM171A1Q5VUB5 890 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 RNF165Q6ZSG1 346 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 APH1BQ8WW43 257 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 CEP295NLQ96MC4 621 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 EGFL8Q99944 293 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 IL37Q9NZH6 218 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 AGO1Q9UL18 857 aaKnown RBP15.12■□□□□ 0.01
DDX55-201ENST00000238146 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.12■□□□□ 0.01
DDX55-201ENST00000238146 DLGAP4Q9Y2H0 992 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 PLXNA3P51805 1871 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 LOC730098B7Z3J9 87 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 H7C0S8 307 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 B4GALT3O60512 393 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 C1QCP02747 245 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 ITGB6P18564 788 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 MAGP20916 626 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 PAX3P23760 479 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 S100A3P33764 101 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 KCNQ1P51787 676 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 VLDLRP98155 873 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 CLIP4Q8N3C7 705 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 MTFMTQ96DP5 389 aaKnown RBP15.12■□□□□ 0.01
DDX55-201ENST00000238146 FUBP3Q96I24 572 aaKnown RBP eCLIP15.12■□□□□ 0.01
DDX55-201ENST00000238146 UROC1Q96N76 676 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 CLSTN3Q9BQT9 956 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 CD244Q9BZW8 370 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 CIPCQ9C0C6 399 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 C6orf62Q9GZU0 229 aaPredicted RBP15.12■□□□□ 0.01
DDX55-201ENST00000238146 MIR1-1HGQ9H1L0 117 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 KRT84Q9NSB2 600 aa15.12■□□□□ 0.01
DDX55-201ENST00000238146 TDRD15B5MCY1 1934 aaKnown RBP15.12■□□□□ 0.01
DDX55-201ENST00000238146 A0A0U1RQF3 1178 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 F5H5T6 163 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 M0R082 166 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 ASNA1O43681 348 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 TLR5O60602 858 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 WDR47O94967 919 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 F11P03951 625 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 BMP1P13497 986 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 SLC6A4P31645 630 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 BMPR1AP36894 532 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 RPS14P62263 151 aaKnown RBP15.11■□□□□ 0.01
DDX55-201ENST00000238146 RPP38P78345 283 aaKnown RBP15.11■□□□□ 0.01
DDX55-201ENST00000238146 TAF10Q12962 218 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 SPRYD7Q5W111 196 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 DOK6Q6PKX4 331 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 GALNT10Q86SR1 603 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 STK40Q8N2I9 435 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 ATAD1Q8NBU5 361 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 DNASE1L2Q92874 299 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 APOL5Q9BWW9 433 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 AASDHPPTQ9NRN7 309 aa15.11■□□□□ 0.01
DDX55-201ENST00000238146 OLA1Q9NTK5 396 aaKnown RBP15.11■□□□□ 0.01
DDX55-201ENST00000238146 SIRT5Q9NXA8 310 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms