RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 PSIP1O75475 530 aaKnown RBP15.74■□□□□ 0.11
UBE3D-201ENST00000237186 RETP07949 1114 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 SYN1P17600 705 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 NELFEP18615 380 aaKnown RBP15.74■□□□□ 0.11
UBE3D-201ENST00000237186 CDH2P19022 906 aaPredicted RBP15.74■□□□□ 0.11
UBE3D-201ENST00000237186 PTPN6P29350 595 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 BMPR1AP36894 532 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 ETV3P41162 512 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 NEK2P51955 445 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 PLA2G4EQ3MJ16 856 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 ZNF805Q5CZA5 627 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 PRSS36Q5K4E3 855 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 LDLRAP1Q5SW96 308 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 TTC33Q6PID6 262 aaPredicted RBP15.74■□□□□ 0.11
UBE3D-201ENST00000237186 TBPL2Q6SJ96 375 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 RAVER1Q8IY67 606 aaKnown RBP15.74■□□□□ 0.11
UBE3D-201ENST00000237186 MAGEE2Q8TD90 523 aaPredicted RBP15.74■□□□□ 0.11
UBE3D-201ENST00000237186 BTN2A2Q8WVV5 523 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 METTL2AQ96IZ6 378 aaKnown RBP15.74■□□□□ 0.11
UBE3D-201ENST00000237186 SH3GL3Q99963 347 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 ADGRE2Q9UHX3 823 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 INVSQ9Y283 1065 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 PCDHB14Q9Y5E9 798 aa15.74■□□□□ 0.11
UBE3D-201ENST00000237186 FAM220BPB1ANY3 271 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 H3BSA7 217 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 CXCR6O00574 342 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 SLC9A3R1O14745 358 aaPredicted RBP15.73■□□□□ 0.11
UBE3D-201ENST00000237186 GSTA4O15217 222 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 PRMT3O60678 531 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 MTX2O75431 263 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 HPRP00739 348 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 CTSLP07711 333 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 SRPRAP08240 638 aaKnown RBP15.73■□□□□ 0.11
UBE3D-201ENST00000237186 HNRNPA1P09651 372 aaKnown RBP eCLIP15.73■□□□□ 0.11
UBE3D-201ENST00000237186 AMD1P17707 334 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 SDC1P18827 310 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 S100A3P33764 101 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 ALDH3A2P51648 485 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 MTAPQ13126 283 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.73■□□□□ 0.11
UBE3D-201ENST00000237186 PLPP4Q5VZY2 271 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 ABRAXAS1Q6UWZ7 409 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 GPR149Q86SP6 731 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 MICU2Q8IYU8 434 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 CSGALNACT1Q8TDX6 532 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 FIG4Q92562 907 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 PYCR2Q96C36 320 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 ITCHQ96J02 903 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 VPS50Q96JG6 964 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 RDH12Q96NR8 316 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 CPPED1Q9BRF8 314 aaPredicted RBP15.73■□□□□ 0.11
UBE3D-201ENST00000237186 RIOK2Q9BVS4 552 aaKnown RBP15.73■□□□□ 0.11
UBE3D-201ENST00000237186 DNAJB9Q9UBS3 223 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 IL36AQ9UHA7 158 aa15.73■□□□□ 0.11
UBE3D-201ENST00000237186 PLXNB3Q9ULL4 1909 aa15.72■□□□□ 0.11
UBE3D-201ENST00000237186 C16orf96A6NNT2 1141 aa15.72■□□□□ 0.11
UBE3D-201ENST00000237186 FADS2P1A8MWK0 482 aa15.72■□□□□ 0.11
UBE3D-201ENST00000237186 ALPLP05186 524 aa15.72■□□□□ 0.11
UBE3D-201ENST00000237186 TACR1P25103 407 aa15.72■□□□□ 0.11
UBE3D-201ENST00000237186 MAPK9P45984 424 aa15.72■□□□□ 0.11
UBE3D-201ENST00000237186 ARSFP54793 590 aa15.72■□□□□ 0.11
UBE3D-201ENST00000237186 CSTF3Q12996 717 aaKnown RBP15.72■□□□□ 0.11
UBE3D-201ENST00000237186 CHIT1Q13231 466 aa15.72■□□□□ 0.11
UBE3D-201ENST00000237186 ZNF786Q8N393 782 aa15.72■□□□□ 0.11
UBE3D-201ENST00000237186 KIAA1958Q8N8K9 716 aa15.72■□□□□ 0.11
UBE3D-201ENST00000237186 CLHC1Q8NHS4 586 aa15.72■□□□□ 0.11
UBE3D-201ENST00000237186 SPPL3Q8TCT6 385 aa15.72■□□□□ 0.11
UBE3D-201ENST00000237186 CYGBQ8WWM9 190 aa15.72■□□□□ 0.11
UBE3D-201ENST00000237186 ATL1Q8WXF7 558 aa15.72■□□□□ 0.11
UBE3D-201ENST00000237186 APIPQ96GX9 242 aa15.72■□□□□ 0.11
UBE3D-201ENST00000237186 MAGIXQ9H6Y5 334 aa15.72■□□□□ 0.11
UBE3D-201ENST00000237186 CARS2Q9HA77 564 aaKnown RBP15.72■□□□□ 0.11
UBE3D-201ENST00000237186 SLC6A13Q9NSD5 602 aa15.72■□□□□ 0.11
UBE3D-201ENST00000237186 DCAF13Q9NV06 445 aaKnown RBP15.72■□□□□ 0.11
UBE3D-201ENST00000237186 WNT9AO14904 365 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 FGBP02675 491 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 MT-ND1P03886 318 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 ASLP04424 464 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 CISD3P0C7P0 127 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 C21orf58P58505 322 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 DAG1Q14118 895 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 MYBPC3Q14896 1274 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 DPY19L1Q2PZI1 675 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 ZNF284Q2VY69 593 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 GTDC1Q4AE62 458 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 NOXRED1Q6NXP6 359 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 NRSN1Q8IZ57 195 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 TMEM132CQ8N3T6 1108 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 WDR20Q8TBZ3 569 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 CYB5D2Q8WUJ1 264 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 POF1BQ8WVV4 589 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 MYLIPQ8WY64 445 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 GLMNQ92990 594 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 TMBIM1Q969X1 311 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 FBXL20Q96IG2 436 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 CCDC138Q96M89 665 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 RAD9AQ99638 391 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 PPT2Q9UMR5 302 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 HCFC2Q9Y5Z7 792 aa15.71■□□□□ 0.11
UBE3D-201ENST00000237186 WNT6Q9Y6F9 365 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms