RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 BIRC2Q13490 618 aa21.4■■□□□ 1.02
SMARCD2-201ENST00000225742 DPY19L3Q6ZPD9 716 aa21.4■■□□□ 1.02
SMARCD2-201ENST00000225742 NCLNQ969V3 563 aa21.4■■□□□ 1.02
SMARCD2-201ENST00000225742 FBXL8Q96CD0 374 aa21.4■■□□□ 1.02
SMARCD2-201ENST00000225742 TIFAQ96CG3 184 aa21.4■■□□□ 1.02
SMARCD2-201ENST00000225742 VWCEQ96DN2 955 aa21.4■■□□□ 1.02
SMARCD2-201ENST00000225742 TBCDQ9BTW9 1192 aa21.4■■□□□ 1.02
SMARCD2-201ENST00000225742 TBX21Q9UL17 535 aa21.4■■□□□ 1.02
SMARCD2-201ENST00000225742 JUPP14923 745 aa21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 SDC1P18827 310 aa21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 CSTF3Q12996 717 aaKnown RBP21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 IL18R1Q13478 541 aa21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 PTCHD3Q3KNS1 767 aa21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 ZC3H12BQ5HYM0 836 aaKnown RBP21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 LIPJQ5W064 366 aa21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 FRG2Q64ET8 278 aa21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 BRAT1Q6PJG6 821 aa21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 GDPD4Q6W3E5 623 aa21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 DNAJC14Q6Y2X3 702 aaPredicted RBP21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 HIPK1Q86Z02 1210 aa21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 CLHC1Q8NHS4 586 aa21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 NELL1Q92832 810 aa21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 NRBF2Q96F24 287 aa21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 PYURFQ96I23 114 aa21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 METTL2AQ96IZ6 378 aaKnown RBP21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 MAGED4Q96JG8 741 aa21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 FRG2BQ96QU4 278 aa21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 ZBP1Q9H171 429 aa21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 OCEL1Q9H607 264 aa21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 LIN28AQ9H9Z2 209 aaKnown RBP21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 TMPRSS11EQ9UL52 423 aa21.39■■□□□ 1.02
SMARCD2-201ENST00000225742 QSOX1O00391 747 aa21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 NOL3O60936 208 aaKnown RBP21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 UGT2B4P06133 528 aa21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 CTSAP10619 480 aa21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 PRPS1L1P21108 318 aa21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 PTPN6P29350 595 aa21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 SHMT2P34897 504 aa21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 SEMG2Q02383 582 aa21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 MTAPQ13126 283 aa21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 SKIV2LQ15477 1246 aaKnown RBP21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 TRIM60Q495X7 471 aa21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 GTDC1Q4AE62 458 aa21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 C1orf53Q5VUE5 145 aa21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 LILRA6Q6PI73 481 aa21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 PGBD3Q8N328 593 aa21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 ZNF296Q8WUU4 475 aaPredicted RBP21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 MBOAT4Q96T53 435 aa21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 SLC46A2Q9BY10 475 aa21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 PLGRKTQ9HBL7 147 aa21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 NFKBIL1Q9UBC1 381 aaPredicted RBP21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 C3orf18Q9UK00 162 aa21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 BLOC1S6Q9UL45 172 aa21.39■■□□□ 1.01
SMARCD2-201ENST00000225742 ABCB7O75027 752 aa21.38■■□□□ 1.01
SMARCD2-201ENST00000225742 EFCAB14O75071 495 aa21.38■■□□□ 1.01
SMARCD2-201ENST00000225742 FTH1P02794 183 aa21.38■■□□□ 1.01
SMARCD2-201ENST00000225742 AMD1P17707 334 aa21.38■■□□□ 1.01
SMARCD2-201ENST00000225742 VIPR1P32241 457 aa21.38■■□□□ 1.01
SMARCD2-201ENST00000225742 TMBIM6P55061 237 aa21.38■■□□□ 1.01
SMARCD2-201ENST00000225742 SRSF11Q05519 484 aaKnown RBP21.38■■□□□ 1.01
SMARCD2-201ENST00000225742 ZXDCQ2QGD7 858 aaPredicted RBP21.38■■□□□ 1.01
SMARCD2-201ENST00000225742 NEK5Q6P3R8 708 aa21.38■■□□□ 1.01
SMARCD2-201ENST00000225742 RFLNAQ6ZTI6 216 aa21.38■■□□□ 1.01
SMARCD2-201ENST00000225742 SERPINA11Q86U17 422 aa21.38■■□□□ 1.01
SMARCD2-201ENST00000225742 OR13F1Q8NGS4 319 aa21.38■■□□□ 1.01
SMARCD2-201ENST00000225742 SKA2Q8WVK7 121 aaPredicted RBP21.38■■□□□ 1.01
SMARCD2-201ENST00000225742 CDC14AQ9UNH5 594 aa21.38■■□□□ 1.01
SMARCD2-201ENST00000225742 SAMD4AQ9UPU9 718 aaKnown RBP21.38■■□□□ 1.01
SMARCD2-201ENST00000225742 A0A1W2PRU2 124 aa21.37■■□□□ 1.01
SMARCD2-201ENST00000225742 KLHL33A6NCF5 533 aa21.37■■□□□ 1.01
SMARCD2-201ENST00000225742 EVPLLA8MZ36 301 aa21.37■■□□□ 1.01
SMARCD2-201ENST00000225742 BNIP3LO60238 219 aa21.37■■□□□ 1.01
SMARCD2-201ENST00000225742 CCNDBP1O95273 360 aa21.37■■□□□ 1.01
SMARCD2-201ENST00000225742 SERPINA1P01009 418 aa21.37■■□□□ 1.01
SMARCD2-201ENST00000225742 PABPC1P11940 636 aaKnown RBP21.37■■□□□ 1.01
SMARCD2-201ENST00000225742 C21orf58P58505 322 aa21.37■■□□□ 1.01
SMARCD2-201ENST00000225742 CTBSQ01459 385 aa21.37■■□□□ 1.01
SMARCD2-201ENST00000225742 FAM117BQ6P1L5 589 aa21.37■■□□□ 1.01
SMARCD2-201ENST00000225742 KLHDC8AQ8IYD2 350 aa21.37■■□□□ 1.01
SMARCD2-201ENST00000225742 PHACTR4Q8IZ21 702 aa21.37■■□□□ 1.01
SMARCD2-201ENST00000225742 NETO1Q8TDF5 533 aa21.37■■□□□ 1.01
SMARCD2-201ENST00000225742 FAM83DQ9H4H8 585 aa21.37■■□□□ 1.01
SMARCD2-201ENST00000225742 ASAH2Q9NR71 780 aa21.37■■□□□ 1.01
SMARCD2-201ENST00000225742 PPT2Q9UMR5 302 aa21.37■■□□□ 1.01
SMARCD2-201ENST00000225742 H3BMQ9 156 aa21.36■■□□□ 1.01
SMARCD2-201ENST00000225742 CRHBPP24387 322 aa21.36■■□□□ 1.01
SMARCD2-201ENST00000225742 EEF1B2P24534 225 aaKnown RBP21.36■■□□□ 1.01
SMARCD2-201ENST00000225742 DDX6P26196 483 aaKnown RBP eCLIP21.36■■□□□ 1.013e-7■■■■□ 23.2
SMARCD2-201ENST00000225742 ELK4P28324 431 aa21.36■■□□□ 1.01
SMARCD2-201ENST00000225742 DCTP40126 519 aa21.36■■□□□ 1.01
SMARCD2-201ENST00000225742 MAGEA2P43356 314 aa21.36■■□□□ 1.01
SMARCD2-201ENST00000225742 RAD23AP54725 363 aa21.36■■□□□ 1.01
SMARCD2-201ENST00000225742 EMP3P54852 163 aa21.36■■□□□ 1.01
SMARCD2-201ENST00000225742 DUOXA1Q1HG43 343 aa21.36■■□□□ 1.01
SMARCD2-201ENST00000225742 PGS1Q32NB8 556 aa21.36■■□□□ 1.01
SMARCD2-201ENST00000225742 GPR107Q5VW38 600 aa21.36■■□□□ 1.01
SMARCD2-201ENST00000225742 NOXRED1Q6NXP6 359 aa21.36■■□□□ 1.01
SMARCD2-201ENST00000225742 ERICH5Q6P6B1 374 aa21.36■■□□□ 1.01
SMARCD2-201ENST00000225742 B4GALNT2Q8NHY0 566 aa21.36■■□□□ 1.01
SMARCD2-201ENST00000225742 ASZ1Q8WWH4 475 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms