RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 CXCR6O00574 342 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 LPAL2Q16609 132 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 SLC9B1Q4ZJI4 515 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 ARMC3Q5W041 872 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.03■□□□□ 0.48
CLIP2-201ENST00000223398 TXNDC5Q8NBS9 432 aaKnown RBP18.03■□□□□ 0.48
CLIP2-201ENST00000223398 OTUB2Q96DC9 234 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 OR51V1Q9H2C8 321 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 TPK1Q9H3S4 243 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 GGT5P36269 586 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 MEF2AQ02078 507 aaPredicted RBP18.03■□□□□ 0.48
CLIP2-201ENST00000223398 MORN1Q5T089 497 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 SLC29A4Q7RTT9 530 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 PGAM4Q8N0Y7 254 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 RBCK1Q9BYM8 510 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 USP29Q9HBJ7 922 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 EME2A4GXA9 379 aaPredicted RBP18.03■□□□□ 0.48
CLIP2-201ENST00000223398 KCNJ5P48544 419 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 TMEM198Q66K66 360 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 AMER2Q8N7J2 671 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 MAPK15Q8TD08 544 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 CMTM7Q96FZ5 175 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 ANKRD27Q96NW4 1050 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 XYLT2Q9H1B5 865 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 ZNF282Q9UDV7 671 aaPredicted RBP18.03■□□□□ 0.48
CLIP2-201ENST00000223398 FADS3Q9Y5Q0 445 aa18.03■□□□□ 0.48
CLIP2-201ENST00000223398 A8MT66 165 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 TNFRSF10BO14763 440 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 PCDHGA12O60330 932 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 SHOX2O60902 331 aaPredicted RBP18.02■□□□□ 0.48
CLIP2-201ENST00000223398 ID2Q02363 134 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 SLC44A4Q53GD3 710 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 ZNF805Q5CZA5 627 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 FRG2Q64ET8 278 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 SLC9A4Q6AI14 798 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 PDE12Q6L8Q7 609 aaKnown RBP18.02■□□□□ 0.48
CLIP2-201ENST00000223398 SLC22A15Q8IZD6 547 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 PQLC3Q8N755 202 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 CNTD1Q8N815 330 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 RASSF5Q8WWW0 418 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 FRG2BQ96QU4 278 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 FZD3Q9NPG1 666 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 UTS2RQ9UKP6 389 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 GOLGA4Q13439 2230 aaKnown RBP18.02■□□□□ 0.48
CLIP2-201ENST00000223398 CASKO14936 926 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 ZNF623O75123 536 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 UGT2B11O75310 529 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 TRAPPC6AO75865 159 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 GNALP38405 381 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 CRISP3P54108 245 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 RPP38P78345 283 aaKnown RBP18.02■□□□□ 0.48
CLIP2-201ENST00000223398 ARL10Q8N8L6 244 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 IFT27Q9BW83 186 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 OR51B5Q9H339 312 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.02■□□□□ 0.48
CLIP2-201ENST00000223398 LOC730098B7Z3J9 87 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 PITPNM1O00562 1244 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 BCKDKO14874 412 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 SNPHO15079 494 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 CCNB2O95067 398 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 ITGADQ13349 1161 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 PRKD1Q15139 912 aaPredicted RBP18.02■□□□□ 0.48
CLIP2-201ENST00000223398 DHCR24Q15392 516 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 PTCHD3Q3KNS1 767 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 TBC1D25Q3MII6 688 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 RPS27LQ71UM5 84 aaKnown RBP18.02■□□□□ 0.48
CLIP2-201ENST00000223398 P4HA3Q7Z4N8 544 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 ADAM7Q9H2U9 754 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 PLEKHA1Q9HB21 404 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 HRASLS2Q9NWW9 162 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 CRNNQ9UBG3 495 aaPredicted RBP18.02■□□□□ 0.48
CLIP2-201ENST00000223398 RGS17Q9UGC6 210 aaPredicted RBP18.02■□□□□ 0.48
CLIP2-201ENST00000223398 PIAS3Q9Y6X2 628 aa18.02■□□□□ 0.48
CLIP2-201ENST00000223398 TCEA3O75764 348 aa18.02■□□□□ 0.47
CLIP2-201ENST00000223398 SEC24AO95486 1093 aa18.02■□□□□ 0.47
CLIP2-201ENST00000223398 CYP27C1Q4G0S4 372 aa18.02■□□□□ 0.47
CLIP2-201ENST00000223398 RALGPS1Q5JS13 557 aa18.02■□□□□ 0.47
CLIP2-201ENST00000223398 TMPRSS11AQ6ZMR5 421 aa18.02■□□□□ 0.47
CLIP2-201ENST00000223398 ZNF570Q96NI8 536 aa18.02■□□□□ 0.47
CLIP2-201ENST00000223398 CLEC4MQ9H2X3 399 aaPredicted RBP18.02■□□□□ 0.47
CLIP2-201ENST00000223398 PNPLA3Q9NST1 481 aa18.02■□□□□ 0.47
CLIP2-201ENST00000223398 KLRF1Q9NZS2 232 aa18.02■□□□□ 0.47
CLIP2-201ENST00000223398 CKLFQ9UBR5 152 aa18.02■□□□□ 0.47
CLIP2-201ENST00000223398 SERTAD3Q9UJW9 196 aa18.02■□□□□ 0.47
CLIP2-201ENST00000223398 MED31Q9Y3C7 131 aa18.02■□□□□ 0.47
CLIP2-201ENST00000223398 ELOA3DA6NLF2 546 aaPredicted RBP18.01■□□□□ 0.47
CLIP2-201ENST00000223398 TMEM233B4DJY2 109 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 HNF1BP35680 557 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 MADCAM1Q13477 382 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 KCNJ11Q14654 390 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 ELOA3BQ3SY89 546 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 METTL21CQ5VZV1 264 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 AGTRAPQ6RW13 159 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 ELOA3Q8NG57 546 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 POP5Q969H6 163 aaKnown RBP18.01■□□□□ 0.47
CLIP2-201ENST00000223398 GPC6Q9Y625 555 aaPredicted RBP18.01■□□□□ 0.47
CLIP2-201ENST00000223398 RNGTTO60942 597 aaKnown RBP18.01■□□□□ 0.47
CLIP2-201ENST00000223398 AP1S2P56377 157 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 ZDHHC24Q6UX98 284 aa18.01■□□□□ 0.47
CLIP2-201ENST00000223398 TDRPQ86YL5 185 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms