RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 DOLKQ9UPQ8 538 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 PRRT4C9JH25 899 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 H0YJX3 145 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 STX16-NPEPL1H3BU86 382 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 STX16O14662 325 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 FKBP9O95302 570 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 PRNPP04156 253 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 SNRPB2P08579 225 aaKnown RBP8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 ATP1B2P14415 290 aaPredicted RBP8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 TIMP2P16035 220 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 CFL1P23528 166 aaKnown RBP8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 ADSLP30566 484 aaPredicted RBP8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 RPIAP49247 311 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 MESP2Q0VG99 397 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 GTF2H2Q13888 395 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 GRB7Q14451 532 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 CDKN3Q16667 212 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 PHKG1Q16816 387 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 IMPG1Q17R60 797 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 TANGO2Q6ICL3 276 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 GTF2H2CQ6P1K8 395 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 UBE2R2Q712K3 238 aaPredicted RBP8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 LPCAT2Q7L5N7 544 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 AMIGO2Q86SJ2 522 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 FNDC5Q8NAU1 212 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 GANCQ8TET4 914 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 MTFMTQ96DP5 389 aaKnown RBP8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 ASB16Q96NS5 453 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 RIC8BQ9NVN3 520 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 PCTPQ9UKL6 214 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 PCDHGB4Q9UN71 923 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 ASB1Q9Y576 335 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 PCDHGB5Q9Y5G0 923 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 NOTCH4Q99466 2003 aa8.7□□□□□ -1.02
MTHFD1-201ENST00000216605 SYNDIG1LA6NDD5 238 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 PRR23AA6NEV1 266 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 ZSCAN5BA6NJL1 495 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 SLC22A2O15244 555 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 ZW10O43264 779 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 SYNCRIPO60506 623 aaKnown RBP8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 GUCY1B2O75343 617 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 ESRRBO95718 433 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 CAPN1P07384 714 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 CTSLP07711 333 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 ANXA5P08758 320 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 ZNF30P17039 623 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 RPS3P23396 243 aaKnown RBP eCLIP8.69□□□□□ -1.022e-6■■■□□ 16.9
MTHFD1-201ENST00000216605 BCAP31P51572 246 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 ESRRGP62508 458 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 ABRQ12979 859 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 PTK2BQ14289 1009 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 NR6A1Q15406 480 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 DUSP6Q16828 381 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 KRT80Q6KB66 452 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 CORO6Q6QEF8 472 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 MACC1Q6ZN28 852 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 ZNF600Q6ZNG1 722 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 EFL1Q7Z2Z2 1120 aaKnown RBP8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 MMAAQ8IVH4 418 aaKnown RBP8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 PGAM4Q8N0Y7 254 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 MIER2Q8N344 545 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 BHLHE22Q8NFJ8 381 aaPredicted RBP8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 HCAR2Q8TDS4 363 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 LYSMD1Q96S90 227 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 SMAD5Q99717 465 aaKnown RBP8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 KXD1Q9BQD3 176 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 GIN1Q9NXP7 522 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 MARK1Q9P0L2 795 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 KLHL3Q9UH77 587 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 ZNHIT2Q9UHR6 403 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 MTCL1Q9Y4B5 1905 aaKnown RBP8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 RANBP2P49792 3224 aaKnown RBP8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 SOBPA7XYQ1 873 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 MRASO14807 208 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 ANGPT2O15123 496 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 H6PDO95479 791 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 SRPRAP08240 638 aaKnown RBP8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 UROSP10746 265 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 XRCC1P18887 633 aaPredicted RBP8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 TCEA1P23193 301 aaKnown RBP8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 MAP4P27816 1152 aaKnown RBP8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 CCR7P32248 378 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 EVI2BP34910 448 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 KRT6CP48668 564 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 PTPN5P54829 565 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 GK3PQ14409 553 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 PIGGQ5H8A4 983 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 RAET1GQ6H3X3 334 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 GOLGA7Q7Z5G4 137 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 OR8H2Q8N162 312 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 MRGPRX3Q96LB0 322 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 MCCC1Q96RQ3 725 aaPredicted RBP8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 CTRCQ99895 268 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 PKP2Q99959 881 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 OSBPL11Q9BXB4 747 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 ACTR8Q9H981 624 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 MRPL40Q9NQ50 206 aaKnown RBP8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 KLQ9UEF7 1012 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 ZMIZ1Q9ULJ6 1067 aa8.69□□□□□ -1.02
MTHFD1-201ENST00000216605 MYRFQ9Y2G1 1151 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms