RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 TEAD2Q15562 447 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 MACC1Q6ZN28 852 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 Q6ZVL8 140 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 SELENOMQ8WWX9 145 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 NCLNQ969V3 563 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 EGLN2Q96KS0 407 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 PPP3R2Q96LZ3 170 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 ASAH2Q9NR71 780 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 PAIP2BQ9ULR5 123 aaKnown RBP12.8□□□□□ -0.36
CTNS-201ENST00000046640 SLC22A14Q9Y267 594 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 INVSQ9Y283 1065 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 CFAP99D6REC4 459 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 HS6ST1O60243 411 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 CST1P01037 141 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 ANXA5P08758 320 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 C1SP09871 688 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 EPORP19235 508 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 TACR1P25103 407 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 RAD23AP54725 363 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 EEFSECP57772 596 aaKnown RBP12.8□□□□□ -0.36
CTNS-201ENST00000046640 GRIK2Q13002 908 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 DDX39BQ13838 428 aaKnown RBP12.8□□□□□ -0.36
CTNS-201ENST00000046640 PGS1Q32NB8 556 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 TTLL9Q3SXZ7 439 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 BROXQ5VW32 411 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 PLPP4Q5VZY2 271 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 REM2Q8IYK8 340 aaPredicted RBP12.8□□□□□ -0.36
CTNS-201ENST00000046640 C10orf111Q8N326 155 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 FRS2Q8WU20 508 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 TSPEARQ8WU66 669 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 SDCCAG3Q96C92 435 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 OR52E6Q96RD3 313 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 ZBTB18Q99592 522 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 ACPTQ9BZG2 426 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 HPS4Q9NQG7 708 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 ZDHHC3Q9NYG2 299 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 CDH7Q9ULB5 785 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 COL4A6Q14031 1691 aa12.8□□□□□ -0.36
CTNS-201ENST00000046640 TMEM202A6NGA9 273 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 G3V2T6 193 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 PGRP06401 933 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 ETV3P41162 512 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 PLA2G16P53816 162 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 ERVFC1P60507 584 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 SLC7A9P82251 487 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 RELAQ04206 551 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 DAG1Q14118 895 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 SPCS2Q15005 226 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 NKG7Q16617 165 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 PTCHD3Q3KNS1 767 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 ZNF773Q6PK81 442 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 GALNT5Q7Z7M9 940 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 ZDHHC13Q8IUH4 622 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 FAM217AQ8IXS0 508 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 LILRA3Q8N6C8 439 aaPredicted RBP12.79□□□□□ -0.36
CTNS-201ENST00000046640 LMNTD1Q8N9Z9 388 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 OR13F1Q8NGS4 319 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 ZNF420Q8TAQ5 688 aaPredicted RBP12.79□□□□□ -0.36
CTNS-201ENST00000046640 ING5Q8WYH8 240 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 ZNF583Q96ND8 569 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 P2RY13Q9BPV8 354 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 EBPLQ9BY08 206 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 RC3H2Q9HBD1 1191 aaKnown RBP12.79□□□□□ -0.36
CTNS-201ENST00000046640 SLC25A37Q9NYZ2 338 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 WNT6Q9Y6F9 365 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 TRIM43BA6NCK2 446 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 LILRB3O75022 631 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 DEAF1O75398 565 aaPredicted RBP12.79□□□□□ -0.36
CTNS-201ENST00000046640 E2F6O75461 281 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 CLDN9O95484 217 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 CLTBP09497 229 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 BCKDHAP12694 445 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 CYP4B1P13584 511 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 CD97P48960 835 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 FPGSQ05932 587 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 ABRQ12979 859 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 PWP1Q13610 501 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 GPR33Q49SQ1 333 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 FAM98BQ52LJ0 330 aaKnown RBP12.79□□□□□ -0.36
CTNS-201ENST00000046640 CARD16Q5EG05 197 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 XAF1Q6GPH4 301 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 SPRED2Q7Z698 418 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 PTRH1Q86Y79 214 aaKnown RBP12.79□□□□□ -0.36
CTNS-201ENST00000046640 C8orf59Q8N0T1 100 aaPredicted RBP12.79□□□□□ -0.36
CTNS-201ENST00000046640 ELMOD1Q8N336 334 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 OR2T12Q8NG77 320 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 GTF2H4Q92759 462 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 ISG20Q96AZ6 181 aaKnown RBP12.79□□□□□ -0.36
CTNS-201ENST00000046640 TRIM43Q96BQ3 446 aaPredicted RBP12.79□□□□□ -0.36
CTNS-201ENST00000046640 TCF25Q9BQ70 676 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 PARVBQ9HBI1 364 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 KCTD5Q9NXV2 234 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 ADGRE2Q9UHX3 823 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 PCDHB3Q9Y5E6 796 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 ABHD14A-ACY1A0A1B0GW23 586 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 TTC34A8MYJ7 566 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 UPK1AO00322 258 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 XPNPEP2O43895 674 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 INMTO95050 263 aa12.79□□□□□ -0.36
CTNS-201ENST00000046640 ANXA6P08133 673 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms