RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Cryl1Q99KP3 319 aa13.12□□□□□ -0.31
Rnf4-204ENSMUST00000182047 H2bfmQ9DAB5 224 aa13.12□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Carm1Q9WVG6 608 aa13.12□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Nup210Q9QY81 1886 aaKnown RBP13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Wdfy3Q6VNB8 3508 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Scg5P12961 212 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Il1rnP25085 178 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Pold1P52431 1105 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Ufm1P61961 85 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Rps17P63276 135 aaKnown RBP13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Q3TYS2 187 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Cyp2j13Q3UNV4 503 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Esrp1Q3US41 680 aaKnown RBP13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Rbbp7Q60973 425 aaKnown RBP13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Slc13a5Q67BT3 572 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Olfr735Q7TRM4 354 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 IpmkQ7TT16 396 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Fndc11Q80WB0 326 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Cpped1Q8BFS6 312 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Gpat3Q8C0N2 438 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Cstf2tQ8C7E9 632 aaKnown RBP13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Plcl2Q8K394 1128 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Gramd1aQ8VEF1 722 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Olfr570Q8VH12 312 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Ist1Q9CX00 362 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Il22bQ9JJY8 179 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Rai2Q9QVY8 529 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Gsk3bQ9WV60 420 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Fam131cA2ADB2 273 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Ifit3bE9PV48 403 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 GmlE9PX31 176 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Vmn2r120E9PX34 856 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Gm2237E9Q501 211 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Tsc22d2E9Q7M2 769 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Gm3591K7N6X2 186 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 RfngO09009 332 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 P01664 111 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 DtlQ3TLR7 729 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Naa11Q3UX61 218 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Mrm3Q5ND52 418 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Hesx1Q61658 185 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Jak3Q62137 1100 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Krt75Q8BGZ7 551 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 C8bQ8BH35 589 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Chst8Q8BQ86 417 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Rnf167Q91XF4 347 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 PrkxQ922R0 355 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Ifi44lQ9BDB7 447 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 CatsperzQ9CQP8 194 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Bbs2Q9CWF6 721 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Snx2Q9CWK8 519 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Glipr1l1Q9DAG6 236 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Ninj2Q9JL89 143 aa13.11□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Il17dA0A0B4J1G4 205 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Zar1lC3VD30 291 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 PtgdsO09114 189 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 E2f3O35261 457 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Adh5P28474 374 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Polr2iP60898 125 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 P2rx3Q3UR32 397 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Clec7aQ6QLQ4 244 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Ranbp10Q6VN19 620 aaKnown RBP13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Gpr141Q7TQP0 305 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Sgo2Q7TSY8 1164 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Vrk2Q8BN21 503 aaKnown RBP13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Mill2Q8HWE5 355 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Vmn1r206Q8R277 312 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Ppil1Q9D0W5 166 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Q9D112 206 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 S100a14Q9D2Q8 104 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Dhx34Q9DBV3 1145 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Il22Q9JJY9 179 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Bcl10Q9Z0H7 233 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Mrgpra2aA0A0R4J1Z0 331 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Olfr675A0A1B0GSE1 317 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Tcte1A6H639 498 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Gm4969D3YZT1 566 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Gm16494E9Q2Z4 87 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Gm20671F6TVX7 576 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Stc1O55183 247 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Zfp14P10755 501 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 QrfprP83861 433 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Tas2r106Q7M724 308 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 IfneQ80ZF2 192 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Tmem62Q8BXJ9 643 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Mmgt2Q8R3L0 123 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Slc35c2Q8VCX2 364 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Olfr801Q8VEU1 318 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 NpntQ91V88 561 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Pcdha8Q91Y12 946 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Cmtm6Q9CZ69 183 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Ankrd7Q9D504 279 aa13.1□□□□□ -0.31
Rnf4-204ENSMUST00000182047 E9Q0B3 247 aa13.09□□□□□ -0.31
Rnf4-204ENSMUST00000182047 AF366264G3X9P9 502 aa13.09□□□□□ -0.31
Rnf4-204ENSMUST00000182047 C1qbP14106 253 aa13.09□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Mmp11Q02853 492 aa13.09□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Fam20cQ5MJS3 579 aa13.09□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Ubp1Q811S7 540 aa13.09□□□□□ -0.31
Rnf4-204ENSMUST00000182047 UnkQ8BL48 810 aaKnown RBP13.09□□□□□ -0.31
Rnf4-204ENSMUST00000182047 AgmoQ8BS35 447 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms