RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Gm3149E9PW52 257 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Gm8362K7N6Y6 257 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Vmn2r93L7N1Z9 857 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 KeraO35367 351 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Slc10a3P21129 473 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 EpxP49290 716 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Defa14P50712 85 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Brsk1Q5RJI5 778 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 MertkQ60805 994 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Inppl1Q6P549 1257 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Arl5aQ80ZU0 179 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Znf276Q8CE64 614 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Slc29a4Q8R139 528 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Teddm3Q9CQH1 294 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Rpl14Q9CR57 217 aaKnown RBP13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Hspb11Q9D6H2 143 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Rexo2Q9D8S4 237 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Phc2Q9QWH1 850 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Kif1aP33173 1695 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Zfp946F6VWU8 523 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Tmigd3G3X8R9 209 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Scrg1O88745 98 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Ndst2P52850 883 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Dppa5bP85965 119 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 CluQ06890 448 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Cbx5Q61686 191 aaKnown RBP13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Alkbh2Q6P6J4 239 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Olfr814Q7TRH4 310 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Olfr684Q7TRN8 312 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Clec4b1Q7TS58 209 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Prpf38bQ80SY5 542 aaKnown RBP13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Mptx1Q8R1M8 219 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Olfr570Q8VH12 312 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Ska1Q9CPV1 254 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 EmcnQ9R0H2 261 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Tigd2Q0VBL1 525 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Nxpe2Q3U095 558 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Tmed3Q78IS1 221 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Olfr1418Q7TQS3 318 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Serpinb9fQ80UK5 377 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Atat1Q8K341 421 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Pafah2Q8VDG7 390 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Serpinb9gQ8VHQ1 377 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Memo1Q91VH6 297 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Zfp617Q91WM0 559 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Znf639Q99KZ6 485 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Fcf1Q9CTH6 198 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Abcb8Q9CXJ4 717 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Cmss1Q9CZT6 276 aaKnown RBP13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Cngb3Q9JJZ9 694 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Uba2Q9Z1F9 638 aa13.71□□□□□ -0.21
Col3a1-201ENSMUST00000087883 Taar7fQ5QD08 358 aa13.71□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Taar7eQ5QD09 358 aa13.71□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Taar7bQ5QD11 358 aa13.71□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Phf12Q5SPL2 1003 aa13.71□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Cpa6Q5U901 438 aa13.71□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Rad54bQ6PFE3 886 aa13.71□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Proser3Q7TSA6 634 aa13.71□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Pramel7Q810Y8 479 aa13.71□□□□□ -0.22
Col3a1-201ENSMUST00000087883 As3mtQ91WU5 376 aa13.71□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Tmem81Q9D5K1 259 aa13.71□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Atad1Q9D5T0 361 aa13.71□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Ccdc3Q9D6Y1 273 aa13.71□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Mbd3l1Q9D9H3 186 aa13.71□□□□□ -0.22
Col3a1-201ENSMUST00000087883 SerhlQ9EPB5 311 aa13.71□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Gm8127E9Q0P0 100 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Vmn2r11E9Q4X4 861 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Cdh1P09803 884 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Nr4a1P12813 601 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Acvr2aP27038 513 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Polr3bP59470 1133 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 UrodP70697 367 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Pdp1Q3UV70 538 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 CilpQ66K08 1184 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Slc6a7Q6PGE7 637 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 BpifcQ8C186 509 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 MypopQ8R4U1 393 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Spon1Q8VCC9 807 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Ppa2Q91VM9 330 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Psmd13Q9WVJ2 376 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Vmn2r14E9Q759 848 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Gm5798F7BTS7 198 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Top6blJ3QMY9 579 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Psmc3ipO35047 217 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Limk2O54785 638 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 MutP16332 748 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Zfp37P17141 594 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Cd247P24161 164 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Fbxw11Q5SRY7 542 aaKnown RBP13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Ptpn21Q62136 1176 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Nr0b2Q62227 260 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Dalrd3Q6PJN8 538 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 AftphQ80WT5 931 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Stx16Q8BVI5 326 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Bend5Q8C6D4 421 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Olfr183Q8VFB9 309 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Pycr2Q922Q4 320 aaKnown RBP13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 2410137M14RikQ9CWF0 162 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Fbxl20Q9CZV8 436 aa13.7□□□□□ -0.22
Col3a1-201ENSMUST00000087883 Dnajb4Q9D832 337 aa13.7□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms