RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 OTUD3Q5T2D3 398 aaPredicted RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 STXBP5Q5T5C0 1151 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 ASTLQ6HA08 431 aaPredicted RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 USP43Q70EL4 1123 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 P2RY8Q86VZ1 359 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 ZCCHC9Q8N567 271 aaKnown RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 CDC26Q8NHZ8 85 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 PIWIL1Q96J94 861 aaKnown RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 TBL1YQ9BQ87 522 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 MKRN2Q9H000 416 aaKnown RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 CLPBQ9H078 707 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 GBA3Q9H227 469 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 FAM83DQ9H4H8 585 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 GPN1Q9HCN4 374 aaPredicted RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 TMEM30AQ9NV96 361 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 GRIP1Q9Y3R0 1128 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 SDK1Q7Z5N4 2213 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 SCN5AQ14524 2016 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 OR14I1A6ND48 311 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 MOSPD3O75425 235 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 CNTN5O94779 1100 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 SERPINA1P01009 418 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 THRBP10828 461 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 NFKB1P19838 968 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 SDHBP21912 280 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 HTR2BP41595 481 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 ZNF234Q14588 700 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 CLCA4Q14CN2 919 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 ACSBG2Q5FVE4 666 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 ZNF517Q6ZMY9 492 aaPredicted RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 DGLUCYQ7Z3D6 616 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 SAMD14Q8IZD0 417 aaPredicted RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 CACTIN-AS1Q8N1I8 211 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 DENND6BQ8NEG7 585 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 BPIFB6Q8NFQ5 453 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 SLC9A6Q92581 669 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 ERLEC1Q96DZ1 483 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 PRICKLE1Q96MT3 831 aaPredicted RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 IL12RB2Q99665 862 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 ACE2Q9BYF1 805 aaPredicted RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 KCNH6Q9H252 994 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 PPA2Q9H2U2 334 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 MED11Q9P086 117 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 IFT52Q9Y366 437 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 NME7Q9Y5B8 376 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 KNTC1P50748 2209 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 UBA6A0AVT1 1052 aaPredicted RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 METTL21EPA6NDL7 271 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 CCDC154A6NI56 674 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 NR5A2O00482 541 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 ITGB7P26010 798 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 IL1R2P27930 398 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 WASP42768 502 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 GPR1P46091 355 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 RPIAP49247 311 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 PITX1P78337 314 aaPredicted RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 SEMA3BQ13214 749 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 HAGHLQ6PII5 290 aaPredicted RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 IL27RAQ6UWB1 636 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 ZNF572Q7Z3I7 529 aaPredicted RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 THAP5Q7Z6K1 395 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 KRT78Q8N1N4 520 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 C19orf43Q9BQ61 176 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 TMEM246Q9BRR3 403 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 RIBC2Q9H4K1 309 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 SPAG4Q9NPE6 437 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 RDH8Q9NYR8 311 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 UBQLN2Q9UHD9 624 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 C3orf18Q9UK00 162 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 MFHAS1Q9Y4C4 1052 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 NUAK1O60285 661 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 PLOD3O60568 738 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 VNN2O95498 520 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 AOC1P19801 751 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 PTPN3P26045 913 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 CD86P42081 329 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 AP1S2P56377 157 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 STARD6P59095 220 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 ACTR3P61158 418 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 ILF3Q12906 894 aaKnown RBP eCLIP5.56□□□□□ -1.52
RTTN-218ENST00000640408 MAB21L1Q13394 359 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 FASTKQ14296 549 aaKnown RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 USP10Q14694 798 aaKnown RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 TGFBIQ15582 683 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 FUT11Q495W5 492 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 TMEM196Q5HYL7 178 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 FAXCQ5TGI0 409 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 PTRHD1Q6GMV3 140 aaKnown RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 PGBD2Q6P3X8 592 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 AFTPHQ6ULP2 937 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 GLT6D1Q7Z4J2 308 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 BMP8AQ7Z5Y6 402 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 TMEM17Q86X19 198 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 TTC29Q8NA56 475 aaPredicted RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 STYXQ8WUJ0 223 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 C12orf43Q96C57 262 aaKnown RBP5.56□□□□□ -1.52
RTTN-218ENST00000640408 SSX3Q99909 188 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 GSDMCQ9BYG8 508 aa5.56□□□□□ -1.52
RTTN-218ENST00000640408 NOL11Q9H8H0 719 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms