RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 FTH1P02794 183 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 PIM1P11309 404 aaPredicted RBP14.41□□□□□ -0.1
SYNE2-228ENST00000639659 ITGAXP20702 1163 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 GRIA3P42263 894 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 OR1D4P47884 311 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 ARSFP54793 590 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 EIF3EP60228 445 aaKnown RBP14.41□□□□□ -0.1
SYNE2-228ENST00000639659 ARG2P78540 354 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 CACNG1Q06432 222 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 POU6F1Q14863 301 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 NKG7Q16617 165 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 SLC5A12Q1EHB4 618 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 KIRREL2Q6UWL6 708 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 BBS12Q6ZW61 710 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 TMTC1Q8IUR5 882 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 MCATQ8IVS2 390 aaKnown RBP14.41□□□□□ -0.1
SYNE2-228ENST00000639659 PIANPQ8IYJ0 282 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 TAB3Q8N5C8 712 aaPredicted RBP14.41□□□□□ -0.1
SYNE2-228ENST00000639659 BCORP1Q8N888 145 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 CATSPER1Q8NEC5 780 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 OR1N1Q8NGS0 311 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 OR5K2Q8NHB8 316 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 CFAP61Q8NHU2 1237 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 KRT35Q92764 455 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 FKBP10Q96AY3 582 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 RUBCNLQ9H714 662 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 CUTCQ9NTM9 273 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 SH3BGRL2Q9UJC5 107 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.41□□□□□ -0.1
SYNE2-228ENST00000639659 CNTRLQ7Z7A1 2325 aa14.41□□□□□ -0.1
SYNE2-228ENST00000639659 TRBV5-4A0A0C4DH59 114 aa14.4□□□□□ -0.1
SYNE2-228ENST00000639659 A0A1B0GUH1 482 aa14.4□□□□□ -0.1
SYNE2-228ENST00000639659 OR51F1A6NGY5 319 aa14.4□□□□□ -0.1
SYNE2-228ENST00000639659 AP2A2O94973 939 aa14.4□□□□□ -0.1
SYNE2-228ENST00000639659 TPBGLP0DKB5 382 aa14.4□□□□□ -0.1
SYNE2-228ENST00000639659 RBP3P10745 1247 aa14.4□□□□□ -0.1
SYNE2-228ENST00000639659 GRNP28799 593 aaKnown RBP14.4□□□□□ -0.1
SYNE2-228ENST00000639659 KIR2DS3Q14952 304 aa14.4□□□□□ -0.1
SYNE2-228ENST00000639659 B3GNTL1Q67FW5 361 aaPredicted RBP14.4□□□□□ -0.1
SYNE2-228ENST00000639659 ISLR2Q6UXK2 745 aa14.4□□□□□ -0.1
SYNE2-228ENST00000639659 COX15Q7KZN9 410 aa14.4□□□□□ -0.1
SYNE2-228ENST00000639659 OVCH1Q7RTY7 1134 aa14.4□□□□□ -0.1
SYNE2-228ENST00000639659 DTWD1Q8N5C7 304 aa14.4□□□□□ -0.1
SYNE2-228ENST00000639659 TTC29Q8NA56 475 aaPredicted RBP14.4□□□□□ -0.1
SYNE2-228ENST00000639659 COG1Q8WTW3 980 aa14.4□□□□□ -0.1
SYNE2-228ENST00000639659 IL17FQ96PD4 163 aa14.4□□□□□ -0.1
SYNE2-228ENST00000639659 SPSB2Q99619 263 aa14.4□□□□□ -0.1
SYNE2-228ENST00000639659 MESP1Q9BRJ9 268 aa14.4□□□□□ -0.1
SYNE2-228ENST00000639659 CRB3Q9BUF7 120 aa14.4□□□□□ -0.1
SYNE2-228ENST00000639659 MRM3Q9HC36 420 aaKnown RBP14.4□□□□□ -0.1
SYNE2-228ENST00000639659 ZNF160Q9HCG1 818 aa14.4□□□□□ -0.1
SYNE2-228ENST00000639659 NLE1Q9NVX2 485 aaPredicted RBP14.4□□□□□ -0.1
SYNE2-228ENST00000639659 ITGB1BP2Q9UKP3 347 aa14.4□□□□□ -0.1
SYNE2-228ENST00000639659 CSMD1Q96PZ7 3565 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 TRGV8A0A0C4DH27 118 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 DSCR3O14972 297 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 MFAP3LO75121 409 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 KLHL18O94889 574 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 AP2A1O95782 977 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 F10P00742 488 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 GSTM1P09488 218 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 ACADLP28330 430 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 PKLRP30613 574 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 NSG1P42857 185 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 GSTM4Q03013 218 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 SRSF11Q05519 484 aaKnown RBP14.39□□□□□ -0.11
SYNE2-228ENST00000639659 MSLNQ13421 630 aaPredicted RBP14.39□□□□□ -0.11
SYNE2-228ENST00000639659 DENND5AQ6IQ26 1287 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 ARHGEF18Q6ZSZ5 1173 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 C8orf44Q96CB5 159 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 VPS50Q96JG6 964 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 SPATA13Q96N96 652 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 SELENOSQ9BQE4 189 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 CHRNA10Q9GZZ6 450 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 WDR54Q9H977 334 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 PLA2G3Q9NZ20 509 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 PTGFRNQ9P2B2 879 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 TFR2Q9UP52 801 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 OTOGQ6ZRI0 2925 aa14.39□□□□□ -0.11
SYNE2-228ENST00000639659 ANKRD17O75179 2603 aaKnown RBP14.39□□□□□ -0.11
SYNE2-228ENST00000639659 APCP25054 2843 aa14.38□□□□□ -0.11
SYNE2-228ENST00000639659 BHMG1C9JSJ3 638 aaPredicted RBP14.38□□□□□ -0.11
SYNE2-228ENST00000639659 QSOX1O00391 747 aa14.38□□□□□ -0.11
SYNE2-228ENST00000639659 MAP2K7O14733 419 aa14.38□□□□□ -0.11
SYNE2-228ENST00000639659 CBFA2T2O43439 604 aa14.38□□□□□ -0.11
SYNE2-228ENST00000639659 STSP08842 583 aa14.38□□□□□ -0.11
SYNE2-228ENST00000639659 OR56A5P0C7T3 313 aa14.38□□□□□ -0.11
SYNE2-228ENST00000639659 MSNP26038 577 aaKnown RBP14.38□□□□□ -0.11
SYNE2-228ENST00000639659 RAB28P51157 221 aa14.38□□□□□ -0.11
SYNE2-228ENST00000639659 RIPPLY3P57055 190 aa14.38□□□□□ -0.11
SYNE2-228ENST00000639659 VSX2P58304 361 aaPredicted RBP14.38□□□□□ -0.11
SYNE2-228ENST00000639659 Q0VFX4 171 aa14.38□□□□□ -0.11
SYNE2-228ENST00000639659 MFAP5Q13361 173 aa14.38□□□□□ -0.11
SYNE2-228ENST00000639659 GRM7Q14831 915 aa14.38□□□□□ -0.11
SYNE2-228ENST00000639659 ZXDCQ2QGD7 858 aaPredicted RBP14.38□□□□□ -0.11
SYNE2-228ENST00000639659 IGFL2Q6UWQ7 119 aa14.38□□□□□ -0.11
SYNE2-228ENST00000639659 GFRALQ6UXV0 394 aa14.38□□□□□ -0.11
SYNE2-228ENST00000639659 OR11G2Q8NGC1 345 aa14.38□□□□□ -0.11
SYNE2-228ENST00000639659 DENND1AQ8TEH3 1009 aa14.38□□□□□ -0.11
SYNE2-228ENST00000639659 CDKN2AIPNLQ96HQ2 116 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms