RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 SAP18O00422 153 aaKnown RBP16.28■□□□□ 0.2
SCARB2-210ENST00000638567 MANBAO00462 879 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 ZNF598Q86UK7 904 aaKnown RBP16.28■□□□□ 0.2
SCARB2-210ENST00000638567 RAB43Q86YS6 212 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 ACVR1CQ8NER5 493 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 ACDQ96AP0 544 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 C1orf74Q96LT6 269 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 SLC29A1Q99808 456 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 KCNS3Q9BQ31 491 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 RPRD1BQ9NQG5 326 aaKnown RBP16.28■□□□□ 0.2
SCARB2-210ENST00000638567 NLE1Q9NVX2 485 aaPredicted RBP16.28■□□□□ 0.2
SCARB2-210ENST00000638567 CDC14AQ9UNH5 594 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 PLCH1Q4KWH8 1693 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 TCRBV5S1A1TA0A578 114 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 CCR4P51679 360 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 ABHD18Q0P651 414 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 HSPB3Q12988 150 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 PTCHD3Q3KNS1 767 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 CES5AQ6NT32 575 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 MINDY1Q8N5J2 469 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 ZNF221Q9UK13 617 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 C1QTNF3-AMACRE9PGA6 284 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 NME4O00746 187 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 PCSK2P16519 638 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 OR4D2P58180 307 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 GANABQ14697 944 aaKnown RBP16.28■□□□□ 0.2
SCARB2-210ENST00000638567 CBX2Q14781 532 aaPredicted RBP16.28■□□□□ 0.2
SCARB2-210ENST00000638567 ATP6AP1Q15904 470 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 BLOC1S3Q6QNY0 202 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 CHST9Q7L1S5 443 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 FAM20CQ8IXL6 584 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 ZNF420Q8TAQ5 688 aaPredicted RBP16.28■□□□□ 0.2
SCARB2-210ENST00000638567 FCGR1BQ92637 280 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 ZNF382Q96SR6 550 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 CNPPD1Q9BV87 410 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 SYNDIG1Q9H7V2 258 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 POPDC3Q9HBV1 291 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 WDR6Q9NNW5 1121 aaKnown RBP16.28■□□□□ 0.2
SCARB2-210ENST00000638567 ZDHHC3Q9NYG2 299 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 FZD4Q9ULV1 537 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 PCDHGA7Q9Y5G6 932 aa16.28■□□□□ 0.2
SCARB2-210ENST00000638567 XPNPEP2O43895 674 aa16.27■□□□□ 0.2
SCARB2-210ENST00000638567 TPST2O60704 377 aa16.27■□□□□ 0.2
SCARB2-210ENST00000638567 CCNDBP1O95273 360 aa16.27■□□□□ 0.2
SCARB2-210ENST00000638567 TLX1P31314 330 aaPredicted RBP16.27■□□□□ 0.2
SCARB2-210ENST00000638567 RFC2P35250 354 aa16.27■□□□□ 0.2
SCARB2-210ENST00000638567 PIGFQ07326 219 aa16.27■□□□□ 0.2
SCARB2-210ENST00000638567 RFTN2Q52LD8 501 aaPredicted RBP16.27■□□□□ 0.2
SCARB2-210ENST00000638567 TNFAIP8L2Q6P589 184 aaPredicted RBP16.27■□□□□ 0.2
SCARB2-210ENST00000638567 HDDC2Q7Z4H3 204 aa16.27■□□□□ 0.2
SCARB2-210ENST00000638567 IPCEF1Q8WWN9 437 aaPredicted RBP16.27■□□□□ 0.2
SCARB2-210ENST00000638567 PYURFQ96I23 114 aa16.27■□□□□ 0.2
SCARB2-210ENST00000638567 CCDC177Q9NQR7 707 aaPredicted RBP16.27■□□□□ 0.2
SCARB2-210ENST00000638567 AIG1Q9NVV5 245 aa16.27■□□□□ 0.2
SCARB2-210ENST00000638567 UBAP1Q9NZ09 502 aa16.27■□□□□ 0.2
SCARB2-210ENST00000638567 PCDH7O60245 1069 aa16.27■□□□□ 0.2
SCARB2-210ENST00000638567 ANXA8P13928 327 aa16.27■□□□□ 0.2
SCARB2-210ENST00000638567 PIK3R6Q5UE93 754 aa16.27■□□□□ 0.2
SCARB2-210ENST00000638567 ZNF280BQ86YH2 543 aa16.27■□□□□ 0.2
SCARB2-210ENST00000638567 PHYKPLQ8IUZ5 450 aa16.27■□□□□ 0.2
SCARB2-210ENST00000638567 C2orf15Q8WU43 125 aaKnown RBP16.27■□□□□ 0.2
SCARB2-210ENST00000638567 FERD3LQ96RJ6 166 aa16.27■□□□□ 0.2
SCARB2-210ENST00000638567 CTPS2Q9NRF8 586 aa16.27■□□□□ 0.2
SCARB2-210ENST00000638567 PPM1AP35813 382 aa16.27■□□□□ 0.19
SCARB2-210ENST00000638567 ATP12AP54707 1039 aa16.27■□□□□ 0.19
SCARB2-210ENST00000638567 OR4D1Q15615 310 aa16.27■□□□□ 0.19
SCARB2-210ENST00000638567 ZBTB6Q15916 424 aa16.27■□□□□ 0.19
SCARB2-210ENST00000638567 PLEKHG6Q3KR16 790 aa16.27■□□□□ 0.19
SCARB2-210ENST00000638567 LGI4Q8N135 537 aa16.27■□□□□ 0.19
SCARB2-210ENST00000638567 UBE2J2Q8N2K1 259 aa16.27■□□□□ 0.19
SCARB2-210ENST00000638567 C1orf52Q8N6N3 182 aaKnown RBP16.27■□□□□ 0.19
SCARB2-210ENST00000638567 TMIGD2Q96BF3 282 aa16.27■□□□□ 0.19
SCARB2-210ENST00000638567 ART5Q96L15 291 aa16.27■□□□□ 0.19
SCARB2-210ENST00000638567 ZNF282Q9UDV7 671 aaPredicted RBP16.27■□□□□ 0.19
SCARB2-210ENST00000638567 RASAL1O95294 804 aa16.27■□□□□ 0.19
SCARB2-210ENST00000638567 NPPAP01160 153 aa16.27■□□□□ 0.19
SCARB2-210ENST00000638567 PRKCZQ05513 592 aa16.27■□□□□ 0.19
SCARB2-210ENST00000638567 ZNF534Q76KX8 674 aa16.27■□□□□ 0.19
SCARB2-210ENST00000638567 CHMP1BQ7LBR1 199 aa16.27■□□□□ 0.19
SCARB2-210ENST00000638567 DNAJB7Q7Z6W7 309 aaPredicted RBP16.27■□□□□ 0.19
SCARB2-210ENST00000638567 CMTR2Q8IYT2 770 aaKnown RBP16.27■□□□□ 0.19
SCARB2-210ENST00000638567 IZUMO1Q8IYV9 350 aa16.27■□□□□ 0.19
SCARB2-210ENST00000638567 OR52B6Q8NGF0 335 aa16.27■□□□□ 0.19
SCARB2-210ENST00000638567 MRPL39Q9NYK5 338 aaKnown RBP16.27■□□□□ 0.19
SCARB2-210ENST00000638567 EBF1Q9UH73 591 aa16.27■□□□□ 0.19
SCARB2-210ENST00000638567 GPSM3Q9Y4H4 160 aa16.27■□□□□ 0.19
SCARB2-210ENST00000638567 PRKAR1AP10644 381 aa16.26■□□□□ 0.19
SCARB2-210ENST00000638567 CAPN3P20807 821 aa16.26■□□□□ 0.19
SCARB2-210ENST00000638567 CCDC80Q76M96 950 aa16.26■□□□□ 0.19
SCARB2-210ENST00000638567 ZNF438Q7Z4V0 828 aa16.26■□□□□ 0.19
SCARB2-210ENST00000638567 ANKFN1Q8N957 763 aa16.26■□□□□ 0.19
SCARB2-210ENST00000638567 SLC43A3Q8NBI5 491 aa16.26■□□□□ 0.19
SCARB2-210ENST00000638567 OR8D1Q8WZ84 308 aa16.26■□□□□ 0.19
SCARB2-210ENST00000638567 PSKH2Q96QS6 385 aa16.26■□□□□ 0.19
SCARB2-210ENST00000638567 IL4I1Q96RQ9 567 aa16.26■□□□□ 0.19
SCARB2-210ENST00000638567 SUV39H2Q9H5I1 410 aa16.26■□□□□ 0.19
SCARB2-210ENST00000638567 FLRT1Q9NZU1 646 aa16.26■□□□□ 0.19
SCARB2-210ENST00000638567 N4BP2Q86UW6 1770 aaPredicted RBP16.26■□□□□ 0.19
SCARB2-210ENST00000638567 FPR1P21462 350 aa16.26■□□□□ 0.19
SCARB2-210ENST00000638567 DGKEP52429 567 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms