RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 ZNF638Q14966 1978 aaKnown RBP11.75□□□□□ -0.53
CAPN3-221ENST00000638141 FAM170BA6NMN3 283 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 CD3EAPO15446 510 aaKnown RBP11.75□□□□□ -0.53
CAPN3-221ENST00000638141 DNTTP04053 509 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 COL6A1P12109 1028 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 BMP8BP34820 402 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 PGGT1BP53609 377 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 ZNF33AQ06730 810 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 PCDH1Q08174 1060 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 DBPQ10586 325 aaPredicted RBP11.75□□□□□ -0.53
CAPN3-221ENST00000638141 CSHL1Q14406 222 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 TARBP2Q15633 366 aaKnown RBP11.75□□□□□ -0.53
CAPN3-221ENST00000638141 ARHGAP36Q6ZRI8 547 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 BMP8AQ7Z5Y6 402 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 COMMD7Q86VX2 200 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 CYP4Z1Q86W10 505 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 ZFAND4Q86XD8 727 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 TMC8Q8IU68 726 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 TAGAPQ8N103 731 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 FAM86B1Q8N7N1 296 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 PPHLN1Q8NEY8 458 aaKnown RBP11.75□□□□□ -0.53
CAPN3-221ENST00000638141 OR52H1Q8NGJ2 320 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 TRPM4Q8TD43 1214 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 BTN2A2Q8WVV5 523 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 RHNO1Q9BSD3 238 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 COPS4Q9BT78 406 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 PRKD2Q9BZL6 878 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 SLC6A17Q9H1V8 727 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 ZNF302Q9NR11 478 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 FAM105AQ9NUU6 356 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 HECAQ9UBI9 543 aaPredicted RBP11.75□□□□□ -0.53
CAPN3-221ENST00000638141 PSORS1C1Q9UIG5 152 aa11.75□□□□□ -0.53
CAPN3-221ENST00000638141 RPS10-NUDT3A0A1W2PQS6 291 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 PCP4L1A6NKN8 68 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 C9JVG2 144 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 BTN3A3O00478 584 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 CACNG3O60359 315 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 PTP4A3O75365 173 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 WISP3O95389 354 aaPredicted RBP11.74□□□□□ -0.53
CAPN3-221ENST00000638141 CDK1P06493 297 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 ZP3P21754 424 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 MAGEA2P43356 314 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 NRIP1P48552 1158 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 RGS6P49758 472 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 SNRPD2P62316 118 aaKnown RBP11.74□□□□□ -0.53
CAPN3-221ENST00000638141 SH3BP2P78314 561 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 OLIG2Q13516 323 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 COL28A1Q2UY09 1125 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 HABP4Q5JVS0 413 aaKnown RBP11.74□□□□□ -0.53
CAPN3-221ENST00000638141 RASAL3Q86YV0 1011 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 SPATA6LQ8N4H0 392 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 C3orf58Q8NDZ4 430 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 ZNF548Q8NEK5 533 aaPredicted RBP11.74□□□□□ -0.53
CAPN3-221ENST00000638141 UBASH3BQ8TF42 649 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 ELMO1Q92556 727 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 FBXW5Q969U6 566 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 ZNF583Q96ND8 569 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 GMLQ99445 158 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 C11orf54Q9H0W9 315 aaPredicted RBP11.74□□□□□ -0.53
CAPN3-221ENST00000638141 OR51E2Q9H255 320 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 SLC6A15Q9H2J7 730 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 TUBB1Q9H4B7 451 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 POLMQ9NP87 494 aaPredicted RBP11.74□□□□□ -0.53
CAPN3-221ENST00000638141 TMEM39AQ9NV64 488 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 SLAMF8Q9P0V8 285 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 KLHL42Q9P2K6 505 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 INVSQ9Y283 1065 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 ANKRD12Q6UB98 2062 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 KIAA0513O60268 411 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 ADAM11O75078 769 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 CELF2O95319 508 aaKnown RBP11.74□□□□□ -0.53
CAPN3-221ENST00000638141 TPOP07202 933 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 RPS17P08708 135 aaKnown RBP11.74□□□□□ -0.53
CAPN3-221ENST00000638141 NCF1P14598 390 aaPredicted RBP11.74□□□□□ -0.53
CAPN3-221ENST00000638141 HOXB8P17481 243 aaPredicted RBP11.74□□□□□ -0.53
CAPN3-221ENST00000638141 PFKLP17858 780 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 ITGB6P18564 788 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 TPMTP51580 245 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 RRAS2P62070 204 aaPredicted RBP11.74□□□□□ -0.53
CAPN3-221ENST00000638141 SCRN3Q0VDG4 424 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 ZNF273Q14593 569 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 GLYR1Q49A26 553 aaPredicted RBP11.74□□□□□ -0.53
CAPN3-221ENST00000638141 KIAA1614Q5VZ46 1190 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 CPZQ66K79 652 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 ARHGAP17Q68EM7 881 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 GPR139Q6DWJ6 353 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 RPS27LQ71UM5 84 aaKnown RBP11.74□□□□□ -0.53
CAPN3-221ENST00000638141 DET1Q7L5Y6 550 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 GALNT10Q86SR1 603 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 CDYL2Q8N8U2 506 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 DUSP18Q8NEJ0 188 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 ZNF675Q8TD23 568 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 B3GALT6Q96L58 329 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 COL21A1Q96P44 957 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 TBCDQ9BTW9 1192 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 ASB7Q9H672 318 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 IFT46Q9NQC8 304 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 NRBP2Q9NSY0 501 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 ZNF224Q9NZL3 707 aa11.74□□□□□ -0.53
CAPN3-221ENST00000638141 MAPRE3Q9UPY8 281 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms