RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 IRAK4Q9NWZ3 460 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 ASIC3Q9UHC3 531 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 VPS9D1Q9Y2B5 631 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 MAN2B2Q9Y2E5 1009 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 MRFAP1Q9Y605 127 aa16.16■□□□□ 0.18
CACNA1A-259ENST00000638114 CTAGE9A4FU28 777 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 E5RI56 91 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 HCRTR1O43613 425 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 OR2B3O76000 313 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 C1orf105O95561 183 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 S1PR4O95977 384 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 RECKO95980 971 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 HBQ1P09105 142 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 PKMP14618 531 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 MAGP20916 626 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 MAGEA3P43357 314 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 ADARP55265 1226 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 IZUMO3Q5VZ72 239 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 LCN10Q6JVE6 187 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 SYVN1Q86TM6 617 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 SYTL1Q8IYJ3 562 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 RAB42Q8N4Z0 105 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 RAD51AP1Q96B01 352 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 RAB11FIP5Q9BXF6 653 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 CHRNA10Q9GZZ6 450 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 INTS10Q9NVR2 710 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 KLHL20Q9Y2M5 609 aa16.15■□□□□ 0.18
CACNA1A-259ENST00000638114 ZCWPW2A0A1B0GU75 182 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 KRT87PA6NCN2 255 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 USP1O94782 785 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 F7P08709 466 aaPredicted RBP16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 RAB40ALP0C0E4 278 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 CCNFP41002 786 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 GABRA4P48169 554 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 GNG11P61952 73 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 CTBP1Q13363 440 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 IL10RAQ13651 578 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 UGT8Q16880 541 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 LONRF1Q17RB8 773 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 CCSMST1Q4G0I0 132 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 RNASEH2BQ5TBB1 312 aaKnown RBP16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 PTRH1Q86Y79 214 aaKnown RBP16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 DENND6AQ8IWF6 608 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 AGGF1Q8N302 714 aaeCLIP16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 ZBTB2Q8N680 514 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 ENDOVQ8N8Q3 282 aaKnown RBP16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 ABHD17AQ96GS6 310 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 CAPZA3Q96KX2 299 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 SPRTNQ9H040 489 aaPredicted RBP16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 ZNF71Q9NQZ8 489 aaPredicted RBP16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 FBXO6Q9NRD1 293 aaPredicted RBP16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 C20orf96Q9NUD7 363 aaPredicted RBP16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 SNX7Q9UNH6 387 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 PLCL2Q9UPR0 1127 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 AP1M2Q9Y6Q5 423 aa16.14■□□□□ 0.17
CACNA1A-259ENST00000638114 SEC16AO15027 2179 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 BSNQ9UPA5 3926 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 PYCARD-AS1I3L0S3 204 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 ZSCAN9O15535 394 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 CTSBP07858 339 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 ATXN8OSP0DMR3 200 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 AGXTP21549 392 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 ATP5DP30049 168 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 SLC1A2P43004 574 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 PTK6Q13882 451 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 GBX1Q14549 363 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 SF1Q15637 639 aaKnown RBP16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 ACSBG2Q5FVE4 666 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 FAM198BQ6UWH4 519 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 DNAJC22Q8N4W6 341 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 ZNF655Q8N720 491 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 MAGEC3Q8TD91 643 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 PDLIM2Q96JY6 352 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 SIGLEC10Q96LC7 697 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 NLNQ9BYT8 704 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 CCDC68Q9H2F9 335 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 INTS7Q9NVH2 962 aaKnown RBP16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 GALPQ9UBC7 116 aa16.13■□□□□ 0.17
CACNA1A-259ENST00000638114 C9J4A7 227 aa16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 H3BMH7 237 aa16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 MKRN2OSH3BPM6 223 aa16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 DNALI1O14645 258 aaPredicted RBP16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 RFPL1O75677 317 aa16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 PMS2P54278 862 aa16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 KLHL38Q2WGJ6 581 aa16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 LACTB2Q53H82 288 aaPredicted RBP16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 C1orf189Q5VU69 101 aa16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 FAM69BQ5VUD6 431 aa16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 ATG14Q6ZNE5 492 aa16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 LMNTD2Q8IXW0 634 aa16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 CALML6Q8TD86 181 aa16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 THAP4Q8WY91 577 aa16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 DPH2Q9BQC3 489 aaPredicted RBP16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 TRIM4Q9C037 500 aa16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 TXLNGQ9NUQ3 528 aa16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 EURLQ9NYK6 297 aa16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 PCYOX1Q9UHG3 505 aa16.12■□□□□ 0.17
CACNA1A-259ENST00000638114 TCFL5Q9UL49 500 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms